Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq9406 105 9e-21 >seq9406 Length=387 Score = 105 bits (116), Expect = 9e-21 Identities = 173/246 (70%), Gaps = 25/246 (10%) Strand=Plus/Plus Query 7 CTTCCATCACCGGGCAGGCGTCAGT-CCGTATACATCGACTTACCGTCTTCGCACGGACC 65 |||||| ||||||||||| ||||| || |||||||| ||||| | || ||| | || Sbjct 117 CTTCCAGCACCGGGCAGGTGTCAGAACCCTATACATCATGTTACCAT-TTAGCAGAGTCC 175 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 | ||||||| ||||||||||| ||| ||||||| || ||| || | Sbjct 176 TAAGTTTTTATTAAACAGTCGCAACCCCCTATTCTGTG---------CCACCTTA----- 221 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTAC-GGGGCC--ATTTTGCCGAATT 182 |||| | || || | ||||||||||||||| || | | |||||||||| || Sbjct 222 -TTTTCATAA-----GGTACTCTTTCTCCCGAAGTTACAGGAGTCATATTTTGCCGAGTT 275 Query 183 CCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 |||| | | ||||| | | | ||||||| | ||| |||| ||||||||||||||| Sbjct 276 CCTTCAATATAGTTCTCTCATTCACCTTAGTCTACTCGACCTATTCACCTGTGTCGGTTT 335 Query 243 ACGGTA 248 | |||| Sbjct 336 AGGGTA 341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694325437932