Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq9406 168 2e-39 seq8516 78.8 2e-12 >seq9406 Length=387 Score = 168 bits (186), Expect = 2e-39 Identities = 162/206 (79%), Gaps = 9/206 (4%) Strand=Plus/Plus Query 76 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTG 135 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 1 CCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCAGAG 60 Query 136 TTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAAT 195 ||||||||||||||||| ||| |||| || | || ||| | | || | | Sbjct 61 TTACGGCCGCCGTTTACTGGGACTTCCATTCAATGC------TTAAACATCTCC--TATT 112 Query 196 TAACCTTCCGGCACCGGGCAGGCGTCA-CACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 ||| ||||| |||||||||||| |||| ||||||||| || || | || |||||| Sbjct 113 TAATCTTCCAGCACCGGGCAGGTGTCAGAACCCTATACATCATGTTACCATTTAGCAGAG 172 Query 255 TGCTGTGTTTTTAATAAACAGTCGCA 280 | || ||||||| |||||||||||| Sbjct 173 TCCTAAGTTTTTATTAAACAGTCGCA 198 >seq8516 Length=450 Score = 78.8 bits (86), Expect = 2e-12 Identities = 67/83 (81%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||||||||||| ||||||||||| | ||||| Sbjct 85 GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATTGGAGACAGCGGGGATGTCGTT 26 Query 73 ACGCCATTCGTGCAGGTCGGAAC 95 || |||||| ||||||||||||| Sbjct 25 ACACCATTCATGCAGGTCGGAAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260660252928