Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq9406 230 5e-58 >seq9406 Length=387 Score = 230 bits (254), Expect = 5e-58 Identities = 236/304 (78%), Gaps = 21/304 (7%) Strand=Plus/Plus Query 70 CCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 129 || ||| ||| |||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 1 CCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCAGAG 60 Query 130 TTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCC-CC 188 ||||||||||||||||||||| ||| |||| ||||| |||| ||| Sbjct 61 TTACGGCCGCCGTTTACTGGGACTTCCATTCAATGCTT---------AAACATCTCCTAT 111 Query 189 TTAACCTTCCAGCACCGGGCAGGCGTCAG-CTCCTATACATCGTCTTGCGACTTAGCAGA 247 |||| |||||||||||||||||| ||||| |||||||||| | || | | |||||||| Sbjct 112 TTAATCTTCCAGCACCGGGCAGGTGTCAGAACCCTATACATCATGTTACCATTTAGCAGA 171 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC----TGTCATAGA 303 ||| |||||| ||||||||||| |||||||| ||| || | ||||| Sbjct 172 GTCCTAAGTTTTTATTAAACAGTCGCAACCCCCTATTCTGTGCCACCTTATTTTCATA-- 229 Query 304 CAGGCACCCCTTCTCCCTAAGTTAC-GGGGTC--ATTTTGCCGAGTTCCTTAACAATAGT 360 ||| || | ||||||| ||||||| || ||| ||||||||||||||||| | ||||| Sbjct 230 -AGGTACTCTTTCTCCCGAAGTTACAGGAGTCATATTTTGCCGAGTTCCTTCAATATAGT 288 Query 361 TCTC 364 |||| Sbjct 289 TCTC 292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062282243584