Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq7987 95.1 3e-17 >seq7987 Length=501 Score = 95.1 bits (104), Expect = 3e-17 Identities = 246/357 (69%), Gaps = 21/357 (6%) Strand=Plus/Plus Query 46 GTTCGGTCCTCC-AGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCC 104 ||||| |||||| | |||| ||||| | |||||| ||| ||| || |||||| | Sbjct 120 GTTCGATCCTCCCAAATAGTT-TTACCTATT-TTTCAATCTGTTCAT-GGTTAGATCACT 176 Query 105 CGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACG 164 |||||||||||||| || | |||| | | | ||| ||| | | || ||||| Sbjct 177 CGGTTTTCGGGTCTTATTTTTA-TAACTAAAAAGCATTTTAAAACTTGTTGTTATCTACG 235 Query 165 CCTCCCCTATTCGGTTAAGCTTTGCCACTGAAAAT-AAGTCGCTGACCCATTATACAAAA 223 ||| | ||| |||||| |||| | | ||||| || | |||| |||||||| ||||| Sbjct 236 CCTACTTTATAAAATTAAGC-TTGCTA-TAAAAATAAACTTGCTGGCCCATTATGCAAAA 293 Query 224 GGTACGCAGTCAC-CCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGAT 282 ||||| | ||||| || ||| | ||| | || |||| ||| ||||||| || Sbjct 294 GGTACACTGTCACTTTAATAAA--AAGTTCCAATTGATTGTTAACATTAAGTTTCAGAAT 351 Query 283 CTATTTCACTCCCCTCTCCGGGGTTC-TTTTCGCCTTTCCCTCACGGTACTAGTTCACT- 340 ||||||| ||| |||| ||||| ||||||| | || ||||| ||||||| Sbjct 352 -TATTTCA-----AACTCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTGTTCACTA 405 Query 341 ATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAG 397 |||||||| | | | || || || |||| |||| |||| || |||| | |||| Sbjct 406 ATCGGTCATTAATTCTTA--AAGGTTTTGAGGGTGGTTCCCCAATTTTCAAAAAAAG 460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241462381056