Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq7271 145 1e-32 >seq7271 Length=595 Score = 145 bits (160), Expect = 1e-32 Identities = 193/263 (73%), Gaps = 9/263 (3%) Strand=Plus/Plus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76 ||||||||| ||||| |||||| ||| |||||| | | || |||| | | Sbjct 225 CTTAGATGCTTTCAGTAATTATCCAAAATAAATTTAGCTACTCGGCGATGCTTT----AA 280 Query 77 TACAACTGGTG-CACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGAC--AGCTC 133 ||||| | | |||||||| ||| || || |||||||||||||||| || || | Sbjct 281 AACAACCGATAACACCAGAGATTTACCCTTCTCGGTCCTCTCGTACTAGAGAGTTAGATT 340 Query 134 CTCTCAAATTTCCTACGCCCACGACG-GATAGGGACCGAACTGTCTCGCGACGTTCTGAA 192 | ||| |||| | | | |||||| ||| ||||||||| ||||||||| || Sbjct 341 TT-TCATTTTTCAAAATATCTATAGAAGATAGGAACCAAACTGTCTCACGACGTTCTAAA 399 Query 193 CCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCC 252 |||| ||| ||| || ||||||| ||||||||||| ||||||||| |||| ||||||| | Sbjct 400 CCCAACTCACGTACCACTTTAATCGGCGAACAGCCGAACCCTTGGAACCTTCTTCAGCTC 459 Query 253 CAGGATGAGACGAGCCGACATCG 275 ||||||| || ||| |||||||| Sbjct 460 CAGGATGTGATGAGTCGACATCG 482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780716160624