Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq5663 161 3e-37 seq4879 93.3 1e-16 >seq5663 Length=928 Score = 161 bits (178), Expect = 3e-37 Identities = 191/254 (75%), Gaps = 5/254 (2%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGC-GACGATCAGTAGCCGAC 219 |||| |||||| ||||||||| ||| | |||||| || ||| ||| |||| | Sbjct 675 GCGTAAGATTAGGTAGTTGGTAGTTTAAAAGACTACCAAAGCCGACTATCTTTAGCTGGT 734 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 ||| || ||||| |||||||||| |||||||||||| ||||||| | |||||| Sbjct 735 TTGAAAGAATGATCAGCCACATTGGGACTGAGACACGGCCCAAACTTTTTTAA-AGGCAG 793 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||| ||| |||||| || ||||| |||| |||||| || ||||| || || Sbjct 794 CAGTGGGGAATTTTGGACAATGAGCGAAAGCTTGATCCAGCAATACCAAGTGAGTGAAGA 853 Query 340 AGGC--CTTCGGGTCGTAAA-GCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAG 396 |||| || || | |||| ||||| || | ||||| || |||||| |||||| | || Sbjct 854 AGGCTAATTAGGTTGTTAAAGGCTCTTTCATTAAGGAGGAAAATGACAGTACTTAAAGAA 913 Query 397 GAAGCCCCGGCTAA 410 |||| ||||| ||| Sbjct 914 GAAGTCCCGGTTAA 927 >seq4879 Length=1216 Score = 93.3 bits (102), Expect = 1e-16 Identities = 73/86 (85%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 414 CGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTA 473 |||||||||||||||||||||||| ||||| ||| |||| |||||| | | |||||| Sbjct 3 CGTGCCAGCAGCCGCGGTAATACGGGAGGGGCGAGCATTATTCGGAATGA-TTAGGCGTA 61 Query 474 AAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||||| ||||||||||| |||||| Sbjct 62 AAGGGTTTGTAGGTGGTTTTTTAAGT 87 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497434006016