Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3464 250 5e-64 >seq3464 Length=2197 Score = 250 bits (276), Expect = 5e-64 Identities = 247/317 (78%), Gaps = 8/317 (3%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC----TTTGGCGGGTCGCCGGCTTC 75 || |||||||| | |||||||||| | || | ||| | ||| | | |||| Sbjct 841 GAACGAGACCTCCGCGTGCTAAATAGTCCCGCTTACAATTTTTTGTAGGTAGTGGACTTC 782 Query 76 TTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||| | || | ||| || | ||||||| |||||||||||||||||||||| Sbjct 781 TTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTGTGAT 722 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||||||||||||||||||||||||||| |||||||| | |||| Sbjct 721 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATACCACC 662 Query 193 -TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 ||| || ||| |||||||||||||| || ||||||| |||||||| |||| Sbjct 661 CTTGTTCGATAGGACTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGATTGTTGC 602 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 |||| | |||| |||||||||| |||||||| ||| ||||||||| || ||||||| Sbjct 601 AATTTTCAATCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGATTA 542 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||||||||||| Sbjct 541 CGTCCCTGCCCTTTGTA 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947095012352