Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950935.1_202016-12-27] 11,084 sequences; 34,541,218 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq9406 122 3e-25 seq8516 104 8e-20 >seq9406 Length=387 Score = 122 bits (134), Expect = 3e-25 Identities = 81/90 (90%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 |||||| |||||||||||||||||||||||||||||||||||||||||||| || | || Sbjct 1 CCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCAGAG 60 Query 454 TTACCACCGCCGTTTACTGGGGCTTCAATT 483 |||| ||||||||||||||| |||| ||| Sbjct 61 TTACGGCCGCCGTTTACTGGGACTTCCATT 90 >seq8516 Length=450 Score = 104 bits (114), Expect = 8e-20 Identities = 233/344 (68%), Gaps = 17/344 (5%) Strand=Plus/Minus Query 76 ACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCA-GTTAAACTACCCACC 134 ||||||| | |||||||||| || ||||| | |||||||| || |||||||| ||| Sbjct 335 ACCTTTGTACACCTCCGTTACTCCTTAGGAGGTGA-CCGCCCCAAGTCAAACTACCAACC 277 Query 135 AGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACGGTCAGAGTGG 194 | ||||||| || | || |||| |||| | | | ||||||| Sbjct 276 ATACACTGTCT---------ATTTTTTAAAAATATTAGTTATCTATTTTAATAAGAGTGG 226 Query 195 TATTTCAACAACGACTCCACAAC-CACTAGCGTGGCCGCATCATAGTCTCCCACCTATCC 253 |||||||| | || |||| |||| ||||| | ||| || |||||| ||| | Sbjct 225 TATTTCAATGTCATCTAAACAATTCACTTGCGTGAAGGTCTCAAAGATTCCCACTTATGC 166 Query 254 TACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC---CGGGGTCTTTT 310 |||||| | | |||| ||||| ||| | |||| ||||| | |||||||||| Sbjct 165 TACACATATTAGATAGAATAACAATATAAAGATGTAGTAAAGGTTCTCGCGGGGTCTTTC 106 Query 311 CGTCCTGCCGC-GCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGT 369 |||| | | ||| | ||||||| || || | ||| ||||| | | || | | Sbjct 105 CGTCTAACTATAGAGAATCC-GCATCTTCACGGATAATTCAAATTCACTGAGTCTATATT 47 Query 370 TGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAAC 413 |||||||| ||| |||||||| |||||| ||||||||||||| Sbjct 46 GGAGACAGCGGGGATGTCGTTACACCATTCATGCAGGTCGGAAC 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702211305984