Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq3959 93.3 1e-16 >seq3959 Length=2219 Score = 93.3 bits (102), Expect = 1e-16 Identities = 240/348 (69%), Gaps = 21/348 (6%) Strand=Plus/Minus Query 46 GTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCC 105 ||||| |||| || |||| ||||| | |||||| ||| ||| || |||||| | | Sbjct 1308 GTTCGATCCTTCAAATAGTT-TTACCTATT-TTTCAATCTGTTCAT-GGTTAGATCACTC 1252 Query 106 GGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGC 165 ||||| ||||||| || | || | || | ||| ||| | | || |||||| Sbjct 1251 GGTTT-CGGGTCTTATTTTTATAACTTAAAAGCATTT-TAAAACTTG-TGTTATCTACGC 1195 Query 166 CTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAG-TCGCTGACCCATTATACAAAAG 224 || | ||| |||||||| || | | ||||||| | |||| |||||||| |||||| Sbjct 1194 CTACTTTATAAAATTAAGCTT-GCTA-TAAAAATAAACTTGCTGGCCCATTATGCAAAAG 1137 Query 225 GTACGCAGTCACCC-AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATC 283 |||| | ||||| || ||| | ||| | || |||| ||| ||||||| || Sbjct 1136 GTACACTGTCACTTTAATAAAAAGT--TCCAATTGATTGTTAACATTAAGTTTCAGAAT- 1080 Query 284 TATTTCACTCCCCTCTCCGGGGTTCTTTT-CGCCTTTCCCTCACGGTACTAGTTCACTAT 342 ||||||| | || |||||||| | ||||||| | || ||||| ||||||||| Sbjct 1079 TATTTCAAAC-----TCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTGTTCACTAT 1025 Query 343 CGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCA 390 |||||| | | || || || || |||| |||| |||| ||||||| Sbjct 1024 CGGTCATTAATTATTA--AAGGTTTTGAGGGTGGTTCCCCAATATTCA 979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241411748608