Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F001950955.1_202016-12-27] 15,162 sequences; 47,141,692 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq5583 257 3e-66 >seq5583 Length=1409 Score = 257 bits (284), Expect = 3e-66 Identities = 247/316 (78%), Gaps = 7/316 (2%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGC----TTTGGCGGGTCGCCGGCTTC 75 || |||||||| | |||||||||| | || | ||| | ||| | | |||| Sbjct 876 GAACGAGACCTCCGCGTGCTAAATAGTCCCGCTTACAATTTTTTGTAGGTAGTGGACTTC 935 Query 76 TTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGAT 132 ||||||||||| | || | ||| || | ||||||| |||||||||||||||||||||| Sbjct 936 TTAGAGGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTGTGAT 995 Query 133 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACC 192 |||||||||||||||||||||||||||||||||||||| |||||||| | ||| Sbjct 996 GCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCGTTCAACGAGTATACAACC 1055 Query 193 TTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCA 252 ||| || |||||||||||||||||| || ||||||| |||||||| ||||| Sbjct 1056 TTGATCGATAGGTCTGGGTAATCTTGTGAATGCGCATCGTGCTAGGGATAGATTGTTGCA 1115 Query 253 ATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTAC 312 ||| | |||| |||||||||| |||||||| ||| ||||||||| || |||||||| Sbjct 1116 ATTTTCAATCTTGAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGATTAC 1175 Query 313 GTCCCTGCCCTTTGTA 328 |||||||||||||||| Sbjct 1176 GTCCCTGCCCTTTGTA 1191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947056385536