Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq586 271 3e-70 >seq586 Length=3777 Score = 271 bits (300), Expect = 3e-70 Identities = 244/306 (80%), Gaps = 28/306 (9%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||||||||||| | ||| |||||| |||||| | Sbjct 922 CGTCCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTGTTCGGGTGTGGA 981 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGG--------------AGGTGGGAACCCGTG--- 506 ||||| |||| |||||||||||| || |||| |||| || | Sbjct 982 AACCCAAACGCGAAATGAAAGTGAAGGGCAGTTTACTGTCTGAGGTAGGAAACCTTTGTT 1041 Query 507 ----AGGGTG-CACCATCGACCGATCCTGATGTCTTCG----GATGGATTTGAGTAAGAG 557 |||||| ||| ||||||||||| ||| ||||| || ||||||||| ||| Sbjct 1042 CTCAAGGGTGGCACTATCGACCGATCATGAAC-CTTCGTGGTGAAAGATTTGAGTTTGAG 1100 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 || | |||||| ||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 1101 CACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGGGAA 1160 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 ||||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||||| Sbjct 1161 ACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAG 1220 Query 678 GGGCGA 683 |||||| Sbjct 1221 GGGCGA 1226 Score = 181 bits (200), Expect = 4e-43 Identities = 136/160 (85%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || | || |||||||| | ||||||||||||| Sbjct 389 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTAGGTGGTAAATTCCATCTAAAGCTAAAT 448 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 449 ATTGGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 508 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||| || || ||||| || |||||||||| || Sbjct 509 AGAGAGTTAAAGAGTACCTGAAACTGCTGAAAGGGAATCG 548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079984470200