Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq718 197 4e-48 seq720 118 3e-24 >seq718 Length=103621 Score = 197 bits (218), Expect = 4e-48 Identities = 257/354 (73%), Gaps = 30/354 (8%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| | |||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 4462 CGCAAGATCGAAATTCAAAGGAATTGACGGGAGCCTACACAAGCGGTGGAGCATGTGGTT 4521 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG-ACATCCTCTGACCCCTCTAGAG 125 |||||||| ||||| ||||||||||||| ||||| | || | | | || | Sbjct 4522 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTGCAAATTTTAT------TATA-AA 4574 Query 126 ATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGT 185 ||| ||| | | ||||| | ||||||| |||||||||||||| Sbjct 4575 ATA----TTT-----------ATAATAAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGT 4619 Query 186 GTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--T 243 || |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 4620 GTTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTATTT 4679 Query 244 CATT-----AAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGG 298 ||| || ||||||||| | || | ||| | | |||||||| ||| Sbjct 4680 TATTTAAAAAATAAAAGCACTCTAATAAAAATGTCAATGATAGGTTGAAGGAAGGTAGGG 4739 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATG 352 | |||||||| || ||||| ||||||||| |||||||||||||||||||||||| Sbjct 4740 ATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATG 4793 >seq720 Length=15558 Score = 118 bits (130), Expect = 3e-24 Identities = 130/168 (77%), Gaps = 5/168 (3%) Strand=Plus/Minus Query 329 TTGGGCTACACACGTGCTACAATGGACAATACA--AAG-GGCAGCGAA-ACCGCGAGGTC 384 |||||||||||||||||||||||| | |||| ||| |||| | | | | Sbjct 15557 TTGGGCTACACACGTGCTACAATGATAATTACAGTAAGAGGCAATAATGATTAAAAATTG 15498 Query 385 AAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAA 444 |||||||| ||||| | ||| |||||||||| | | |||||||||| | ||||||| Sbjct 15497 GAGCAAATCTT-TAAAGATTATCTTAGTTCGGATTATGGGCTGCAACTCGCCCATATGAA 15439 Query 445 GCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACGGTGAATACGTT 492 | |||||||||||||||||| ||| ||||||||| ||||||||| ||| Sbjct 15438 GTTGGAATCGCTAGTAATCGCAGAACAGCATGCTGCGGTGAATATGTT 15391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503989111040