Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq722 127 7e-27 >seq722 Length=6654 Score = 127 bits (140), Expect = 7e-27 Identities = 180/252 (71%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 56 ATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTAC 115 ||||||||||| || ||| ||||| || | ||||||||| || |||||||||| Sbjct 5555 ATTCGGAGTTTCTAAGAGTTCAGTAAGTTTTTAAGCCCCCTAGCTCAATGAGTGCTCTAC 5614 Query 116 CTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCAC 175 | || | || | | ||| || | ||| |||||| ||| ||||||||||| | Sbjct 5615 C-CCAGAAAAAGTTTTTAAATGCTCTACTTCAATAGATTTCGCGGAAAACCAGCTATCTC 5673 Query 176 GAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGT 235 ||||||||| ||||||||| |||| ||||| ||||| || | ||| | || || || Sbjct 5674 CGAGTTTGATTAGCCTTTCACTCCTAACCACAAATCATCTCCATATTTTGCCACATATGT 5733 Query 236 GGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTC 295 | ||||| ||||||| || ||||| ||||| ||| ||| | ||||||||| Sbjct 5734 GAGTTCGATCCTCCAAATAGTTTTACCTATTTTTCAATCTGTTCATAGTTAGATCACTCG 5793 Query 296 GCTTCGGGTCTT 307 | |||||||||| Sbjct 5794 GTTTCGGGTCTT 5805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817586840576