Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq722 86.0 2e-14 >seq722 Length=6654 Score = 86.0 bits (94), Expect = 2e-14 Identities = 237/347 (68%), Gaps = 20/347 (6%) Strand=Plus/Plus Query 46 GTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCC 105 ||||| ||||||| |||| ||||| | |||||| ||| ||||| |||||| | | Sbjct 5736 GTTCGATCCTCCAAATAGTT-TTACCTATT-TTTCAATCTGTTCATAGT-TAGATCACTC 5792 Query 106 GGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGC 165 ||||| ||||||| || || || | || | ||| ||| | || |||||| Sbjct 5793 GGTTT-CGGGTCTTATTTTCATAACTTAAAAGCATTT-TAAAACTTGAATTAT-CTACGC 5849 Query 166 CTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAG-TCGCTGACCCATTATACAAAAG 224 || | || |||||||| || | | ||||||| | |||| |||||||| |||||| Sbjct 5850 CTACTTTAAAAAATTAAGCTT-GCTA-TAAAAATAAACTTGCTGGCCCATTATGCAAAAG 5907 Query 225 GTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCT 284 |||| | ||||| | ||| | ||| | || || | ||| ||||||| || | Sbjct 5908 GTACACTGTCACTTTATAAAAAGT--TCCAATTGATTATTAACATTAAGTTTCAGAAT-T 5964 Query 285 ATTTCACTCCCCTCTCCGGGGTTCTTTT-CGCCTTTCCCTCACGGTACTAGTTCACTATC 343 |||||| | || |||||||| | ||||||| | || ||||| |||||||||| Sbjct 5965 ATTTCAAAC-----TCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTGTTCACTATC 6019 Query 344 GGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCA 390 ||||| | | | | | || || |||| |||| |||| ||||||| Sbjct 6020 GGTCATTAATT--TTTACAGGTTTTGAGGGTGGTTCCCCAATATTCA 6064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241591010816