Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq718 170 5e-40 >seq718 Length=103621 Score = 170 bits (188), Expect = 5e-40 Identities = 246/341 (72%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGG 58 ||||| | | |||| |||||||| ||| ||||||||||||||||||||||| || Sbjct 4057 TACTTAAAAAAGAAGTTCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGA 4115 Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||| |||| |||||| | | |||||||||||| ||||||||||| |||||| | Sbjct 4116 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGTTGAAA 4175 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGG- 177 | | || ||| ||| | | ||| |||||| || |||| | Sbjct 4176 AAAACAAATTAAAGCTTAACTTTATAAATTTTTTCAAAACTGAGAAACTTGAGTATAAAT 4235 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || | ||||||| ||| || || | | |||| || |||| ||| ||||| ||| Sbjct 4236 AGAGGATAATGGAATTTCTATTGGAGGGATAAAATATGTTGATAATAGAAGGAAGACCTA 4295 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 |||||||| | |||| | || |||||||||||| ||||||| |||||||| | Sbjct 4296 AAGCGAAGGCAATTATCTGGG-TATATACTGACACTGAGAAACGAAAGCTTGGGGAGCGA 4354 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 ||||||||||| |||||||||||||| || ||||||||||| Sbjct 4355 ACAGGATTAGAGACCCTGGTAGTCCATGCTGTAAACGATGA 4395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203191288832