Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq722 159 1e-36 >seq722 Length=6654 Score = 159 bits (176), Expect = 1e-36 Identities = 313/453 (69%), Gaps = 15/453 (3%) Strand=Plus/Minus Query 34 AGACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGA 93 |||||||||||| ||||||||| | ||| ||| |||| ||||| || |||| Sbjct 5804 AGACCCGAAACCGAGTGATCTAACTATGAACAGATTGAAAAATAGGTAAAACTATTTGGA 5745 Query 94 GGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCT 153 || ||||| ||| |||| | ||||| || ||||| ||||| |||| |||||||||| Sbjct 5744 GGATCGAACTCACATATGTGGCAAAATATGGAGATGATTTGTGGTTAGGAGTGAAAGGCT 5685 Query 154 AAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCCTCAAGTATC 213 || |||||| ||| |||||||||| || ||||| ||||| | |||| || | | | | Sbjct 5684 AATCAAACTCGGAGATAGCTGGTTTTCCGCGAAATCTATTGAAGTAGAGCATTTAAAAAC 5625 Query 214 ACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGACTTACCAAACCATTGC 273 || ||||||||||||| | ||||||||| | | |||||| ||| || Sbjct 5624 TTTTTCTGGGGTAGAGCACTCATTGAGCTAGGGGG-CTTAAAAACTTACTGAACTCTTAG 5566 Query 274 AAACTCCGAATGCGCATCA--GT--TTTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTC 329 ||||||||||| || | | || |||| || || | || ||||||||| Sbjct 5565 AAACTCCGAATACGGAAAAAGGTAATTTA----AATAGACAGACATTAGGCGCTAAGGTC 5510 Query 330 CGTGCCCGAGAGGAGAAGAATCCGGACT-ATCAGCTAAGGCCCCGAAATGACA-GCTAAG 387 | | ||||| || | || || | ||| ||||||| | | |||| | | ||||| Sbjct 5509 TTTTGTCAAGAGGGAAACAGCCCAGATTGATC-GCTAAGGTCTCTAAATAATATTCTAAG 5451 Query 388 TTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTC 447 | ||| || ||||| || | ||| | || | || |||||||||||||||| || Sbjct 5450 TGAAA--AAGGAAGTGAGAAAATGATTACAACCAGTAGGTAGGCTTGGAAGCAGCCA-TC 5394 Query 448 ATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 |||||||| |||||| |||||| | ||| || Sbjct 5393 CTTTAAAGAAAGCGTAATAGCTCATTGGTCTAG 5361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689587767296