Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq586 596 5e-168 >seq586 Length=3777 Score = 596 bits (660), Expect = 5e-168 Identities = 463/542 (85%), Gaps = 21/542 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 3054 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 2995 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| ||||| || || | || Sbjct 2994 ATTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCACGTAGCTC 2935 Query 127 GGCC-CGCGAAGG-AC---CTTAACGCCAGAAAATGGT-----CGGTGAAGACCAGTTCC 176 || | | || | || |||| | |||| || || || | | |||| Sbjct 2934 ACCCACACAAAAGCACAGGCTTACAACTAGAACTAGGCGCCCGCGAGGACGGCTAGTT-- 2877 Query 177 GCTTCAT--TGAT-TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--TTGCGCCGA 231 ||| ||| || | ||||||||| ||| || ||||||||||||||| ||| || || Sbjct 2876 GCTACATAATGGTATAAGTAAAACAACATTAGAAGTAGTGGTATTTCACGGTTG-GCAGA 2818 Query 232 AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAG 291 | ||||||||||||||||||||| |||||||||||||| ||| ||||||||||||| Sbjct 2817 ---GCCTCCCACTTATTCTACACCTCCTAAGTCATTTCACAACGTCAGACTAGAGTCAAG 2761 Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct 2760 CTCAACAGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTC 2701 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct 2700 GCTAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTT 2641 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2640 AGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCG 2581 Query 472 CTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2580 CTTGGTTGAATCTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAA 2521 Query 532 CA 533 || Sbjct 2520 CA 2519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635188161152