Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq57 489 5e-136 >seq57 Length=163382 Score = 489 bits (542), Expect = 5e-136 Identities = 425/516 (82%), Gaps = 20/516 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59 || |||||||||||| | ||| | ||||||| | || ||||||||||||||||| Sbjct 159699 GTTCTCATTCCAATTGCCCGACT-ACAAGAGCCAGAGCATTGTTATTTATTGTCACTACC 159757 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 159758 TCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 159817 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||||| Sbjct 159818 TTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGGT 159877 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 ||||| |||||||||||| |||| |||||||||||||| | ||| | || | || Sbjct 159878 AGGCCCATATCCTACCATCCAAAGCTGATAGGGCAGAAA-CTCAAT---CGATTTACCGC 159933 Query 240 TCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC--CCCGAAG--GGC 294 ||| |||| | || ||||||||||| ||| || | | | ||||||| || Sbjct 159934 ACAA--AAGTGCGGTCCGCACAGTTATTATGACTCAACACAATACCAGCCCGAAGACTGC 159991 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCATGT 349 |||| ||| ||||||||||| | ||| ||||| ||| ||| || |||||| Sbjct 159992 ATTGG-TTTCAATCTAATAAATGCTACCCGTCCGACAAGCAGTTGGGTATTGATGCATGT 160050 Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409 ||||||||||||||||| ||||||||||| |||||||||||||||| | || || ||||| Sbjct 160051 ATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATCGAGTAGACTATAAC 160110 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACATGCATG 468 |||| ||||||||||||||||||||||| ||| | | || ||||||||||||||||||| Sbjct 160111 TGATATAATGAGCCATTCGCAGTTTCACAGTACAAAAGTGTTTATACTTAGACATGCATG 160170 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| ||||||||||||||| Sbjct 160171 GCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 160206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510389064704