Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F001573145.1_202016-02-25] 724 sequences; 35,934,203 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq168 118 1e-21 >seq168 Length=77235 Score = 118 bits (130), Expect = 1e-21 Identities = 258/384 (67%), Gaps = 2/384 (1%) Strand=Plus/Plus Query 162455 TCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAA 162514 |||||||||| || || ||||| || || ||| || | ||| || |||| ||| Sbjct 38276 TCTACCAAGCTTCTACGAGCGAGCTGTACGGCAAAGTGCAAGTGACGCCTCAGAGTGAAC 38335 Query 162515 CCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCA 162574 ||| || | |||||||| || ||||| || || | || | || || ||| |||| Sbjct 38336 TCACGCCGTTCTATCCACGCTCGCCTTACGGGGTCTCAAAGCAATTTGCGTTTTGGAGTG 38395 Query 162575 TCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACG 162634 || ||||| | ||| ||| | || | || | || || || |||||||| | Sbjct 38396 TCGTCAACTATCGTGAAGCCTACGGAATGTACGCAGTGAATGGAATACTGTTCAATCATG 38455 Query 162635 AAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAA 162694 | ||| | || |||| || |||||||| ||||||||| || || | ||||| Sbjct 38456 AGAGCCCTCGGCGAGGGCCAACATTCGTCACCCGCAAGATCACACGCGCTGTAGTCCGAA 38515 Query 162695 TT-AGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGG 162753 | || || | | | |||| ||| | |||||||||| |||| ||||| ||| Sbjct 38516 TCCAGGCCGGTATTGAAGAGTG-TCTTTACATTGGAAACCTAGATGCAAAGCGTGATTGG 38574 Query 162754 GGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGAT 162813 || |||||||||||||| || ||| |||||| ||| | |||||||| | ||| || Sbjct 38575 GGGCACGCCAAAGACTATGTCGAGTGCATGTGGCGCATGATGCAGCAAGAAATGCCCGAA 38634 Query 162814 GATTATGTGATCGCAACTGGTGAG 162837 |||| ||| |||| || || ||| Sbjct 38635 GATTTTGTCGTCGCTACCGGAGAG 38658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691452942294240