Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq325 269 1e-69 >seq325 Length=13547 Score = 269 bits (298), Expect = 1e-69 Identities = 245/309 (79%), Gaps = 31/309 (10%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||||||||||| | ||| |||||| |||||| | Sbjct 12191 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTGTTAGGGTGTGGA 12250 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGG----------------AGGTGGGAACCC---- 503 ||||| ||||||||||||||| || || |||| |||| || Sbjct 12251 AACCCCAGCGCGTAATGAAAGTAAAGGGCAGCATTAGTTGTCTGAGGTAGGAAACCTTTC 12310 Query 504 ---GTGAGGGT--GCACCATCGACCGATCCTGATGTCTTCG----GATGGATTTGAGTAA 554 ||||||| |||| ||||||||||| ||| || || || |||||||||| Sbjct 12311 CTTGTGAGGGGTGGCACTATCGACCGATCATGAAC-CTACGTGGTGAAAGATTTGAGTAT 12369 Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | |||||| ||||||||||||||||||||||||||| |||||||||||||| | Sbjct 12370 GAGCACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGG 12429 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||| ||||| |||| ||||| |||||||||||||||||||| ||||||| Sbjct 12430 GAAACTCTGGTGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGGGTA 12489 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 12490 TAGGGGCGA 12498 Score = 185 bits (204), Expect = 4e-44 Identities = 137/160 (86%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || |||| |||||||| | ||||||||||||| Sbjct 11662 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTGGGTGGTAAATTCCATCTAAAGCTAAAT 11721 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 11722 ATTGGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 11781 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||| || || ||||| || |||||||||| || Sbjct 11782 AGAGAGTTAAAGAGTACCTGAAACTGCTGAAAGGGAACCG 11821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079992707000