Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq320 241 4e-61 >seq320 Length=71188 Score = 241 bits (266), Expect = 4e-61 Identities = 353/498 (71%), Gaps = 35/498 (7%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| |||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct 19092 CGCAAGATTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTT 19151 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGA 126 |||||||| ||||| ||||||||||||| ||||| || | | | | | Sbjct 19152 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATA 19200 Query 127 TAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTG 186 || | ||| | | | ||||| | ||||||| ||||||||||||||| Sbjct 19201 TAAAAATTTATAT--------AAAAA---ACAGGCGTTGCATGGCTGTCGTCAGCTCGTG 19249 Query 187 TCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA---- 242 | |||| ||||| |||||| |||| |||||||||||||| || |||||| | | Sbjct 19250 TTGTGAAATGTTTGGTTAAATCCCTTAACGAGCGCAACCCCTATTGTTAGTTACTAATTT 19309 Query 243 -TCATTAAGTTGG----GCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 | || || | | ||||||| | ||| | |||||||||| Sbjct 19310 ATTATAAAATATTAAAAGTACTCTAACAAAAAGATTAATGATAGGTTAATGGAAGGTGGG 19369 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||| || ||||| ||||||||| |||||||||||||||||||||||| | Sbjct 19370 GATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGATAAT 19429 Query 358 TACAAAG---GGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 ||||| | |||| | | || | ||||||| | |||| | ||| ||||| Sbjct 19430 TACAATGAGAGGCAATAATAATAAAAGTTGGAGCAAAT-CTTTAAAAATTATCTTAGTTC 19488 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||| | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||| Sbjct 19489 GGATTAAGGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCA 19548 Query 475 TGCTACGGTGAATACGTT 492 |||| ||||||||| ||| Sbjct 19549 TGCTGCGGTGAATATGTT 19566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503994886400