Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20oligandrum_20[genbank_20GCA_5F002073175.1_202017-03-28] 340 sequences; 36,794,057 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq314 114 2e-20 >seq314 Length=100689 Score = 114 bits (126), Expect = 2e-20 Identities = 256/382 (67%), Gaps = 2/382 (1%) Strand=Plus/Plus Query 162457 TACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAACC 162516 |||||||| || || ||||| || || ||| || | ||| || |||| ||| | Sbjct 61338 TACCAAGCTTCTACGAGCGAGCTGTACGGCAAAGTGCAAGTGACGCCTCAGAGTGAACTC 61397 Query 162517 ACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCATC 162576 || || | |||||||| || ||||| || || | || | || || ||| |||| || Sbjct 61398 ACGCCGTTCTATCCACGCTCGCCTTACGGGGTCTCAAAGCAATTTGCGTTTTGGAGTGTC 61457 Query 162577 AAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACGAA 162636 ||||| | ||| ||| | || | || | || || || |||||||| || Sbjct 61458 GTCAACTATCGTGAAGCCTACGGAATGTACGCAGTGAATGGAATACTGTTCAATCATGAG 61517 Query 162637 AGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAATT 162696 ||| | || |||| || |||||||| ||||||||| || || | |||||| Sbjct 61518 AGCCCTCGGCGAGGGCCAACATTCGTCACCCGCAAGATCACACGCGCTGTAGTCCGAATC 61577 Query 162697 -AGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGGGG 162755 || || | | | |||| ||| | |||||||||| |||| ||||| ||||| Sbjct 61578 CAGGCCGGTATTGAAGAGTG-TCTTTACATTGGAAACCTAGATGCAAAGCGTGATTGGGG 61636 Query 162756 ACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGATGA 162815 |||||||||||||| || ||| |||||| ||| | |||||||| | ||| || || Sbjct 61637 GCACGCCAAAGACTATGTCGAGTGCATGTGGCGCATGATGCAGCAAGAAATGCCCGAAGA 61696 Query 162816 TTATGTGATCGCAACTGGTGAG 162837 || ||| |||| || || ||| Sbjct 61697 TTTTGTCGTCGCTACCGGAGAG 61718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691456261298400