Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq859 269 1e-69 >seq859 Length=2159 Score = 269 bits (298), Expect = 1e-69 Identities = 245/309 (79%), Gaps = 31/309 (10%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTC-A 463 || ||||||||| |||||||||||||||||||||||| | ||| |||||| |||||| | Sbjct 1805 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCAAGTGTTAGGGTGTGGA 1864 Query 464 AACCCGTGCGCGTAATGAAAGTGAACGG----------------AGGTGGGAACCC---- 503 ||||| ||||||||||||||| || || |||| |||| || Sbjct 1865 AACCCCAGCGCGTAATGAAAGTAAAGGGCAGCATTAGTTGTCTGAGGTAGGAAACCTTTC 1924 Query 504 ---GTGAGGGT--GCACCATCGACCGATCCTGATGTCTTCG----GATGGATTTGAGTAA 554 ||||||| |||| ||||||||||| ||| || || || |||||||||| Sbjct 1925 CTTGTGAGGGGTGGCACTATCGACCGATCATGAAC-CTACGTGGTGAAAGATTTGAGTAT 1983 Query 555 GAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAG 614 ||||| | |||||| ||||||||||||||||||||||||||| |||||||||||||| | Sbjct 1984 GAGCACATATGTTGGTACCCGAAAGATGGTGAACTATGCCTGAGTAGGGTGAAGCCAGGG 2043 Query 615 GAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 |||||||||||||| ||||| |||| ||||| |||||||||||||||||||| ||||||| Sbjct 2044 GAAACTCTGGTGGAAGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAACTTGGGTA 2103 Query 675 TAGGGGCGA 683 ||||||||| Sbjct 2104 TAGGGGCGA 2112 Score = 185 bits (204), Expect = 4e-44 Identities = 137/160 (86%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || |||| |||||||| | ||||||||||||| Sbjct 1276 GAGTCGCGTTGTTTGGGAATGCAGCGCAAAGTGGGTGGTAAATTCCATCTAAAGCTAAAT 1335 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 1336 ATTGGTGCGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 1395 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||||||||| || || ||||| || |||||||||| || Sbjct 1396 AGAGAGTTAAAGAGTACCTGAAACTGCTGAAAGGGAACCG 1435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079977627650