Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq186 232 2e-58 seq720 111 5e-22 >seq186 Length=35805 Score = 232 bits (256), Expect = 2e-58 Identities = 347/491 (71%), Gaps = 35/491 (7%) Strand=Plus/Plus Query 14 TTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCG 73 |||||| ||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct 3 TTGAAATTCAAAGGAATTGACGGGAGTCTACACAAGCGGTGGAGCATGTGGTTTAATTCG 62 Query 74 AAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTCTAGAGATAGAGGT 133 | ||||| ||||||||||||| ||||| || | | | | ||| | | Sbjct 63 ATAATACGCGCAGAACCTTACCAACTCTTG-------CTAA----TTTTTATATAAAAAT 111 Query 134 TTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAG 193 || | | | ||||| | ||||||| |||||||||||||||| |||| Sbjct 112 TTATAT--------AAAAA---ACAGGCGTTGCATGGCTGTCGTCAGCTCGTGTTGTGAA 160 Query 194 ATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA-----TCATTA 248 ||||| |||||| |||| |||||||||||||| || |||||| | | | || | Sbjct 161 ATGTTTGGTTAAATCCCTTAACGAGCGCAACCCCTATTGTTAGTTACTAATTTATTATAA 220 Query 249 AGTTGG----GCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACG 304 | | | ||||||| | ||| | |||||||||||| |||| Sbjct 221 AATATTAAAAGTACTCTAACAAAAAGATTAATGATAGGTTAATGGAAGGTGGGGATGACG 280 Query 305 TCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAG 364 |||| || ||||| ||||||||| |||||||||||||||||||||||| | ||||| | Sbjct 281 TCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGATAATTACAATG 340 Query 365 ---GGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGT 421 |||| | | || | ||||||| | |||| | ||| |||||||||| Sbjct 341 AGAGGCAATAATAATAAAAGTTGGAGCAAAT-CTTTAAAAATTATCTTAGTTCGGATTAA 399 Query 422 AGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTACG 481 | ||| |||||| | ||||||| |||||||||||||||||| ||| ||||||||| || Sbjct 400 GGGCTGAAACTCGCCCTTATGAAGTTGGAATCGCTAGTAATCGCAGAACAGCATGCTGCG 459 Query 482 GTGAATACGTT 492 ||||||| ||| Sbjct 460 GTGAATATGTT 470 >seq720 Length=20439 Score = 111 bits (122), Expect = 5e-22 Identities = 82/96 (85%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 397 TAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCT 456 ||||| | ||| |||||||||| | | |||||||||| | |||||||| |||||||||| Sbjct 1 TAAAGATTATCTTAGTTCGGATTATGGGCTGCAACTCGCCCATATGAAGTTGGAATCGCT 60 Query 457 AGTAATCGTAGATCAGCATGCTACGGTGAATACGTT 492 |||||||| ||| ||||||||| ||||||||| ||| Sbjct 61 AGTAATCGCAGAACAGCATGCTGCGGTGAATATGTT 96 Score = 111 bits (122), Expect = 5e-22 Identities = 82/96 (85%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 397 TAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCT 456 ||||| | ||| |||||||||| | | |||||||||| | |||||||| |||||||||| Sbjct 20439 TAAAGATTATCTTAGTTCGGATTATGGGCTGCAACTCGCCCATATGAAGTTGGAATCGCT 20380 Query 457 AGTAATCGTAGATCAGCATGCTACGGTGAATACGTT 492 |||||||| ||| ||||||||| ||||||||| ||| Sbjct 20379 AGTAATCGCAGAACAGCATGCTGCGGTGAATATGTT 20344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503984313280