Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq260 116 7e-24 seq985 107 4e-21 >seq260 Length=11408 Score = 116 bits (128), Expect = 7e-24 Identities = 122/159 (77%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 20 TTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCA 79 ||| | |||||| ||| || |||||||||||||| | ||| |||||||||||||| Sbjct 1 TTCGCTCATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTTGGGCCGTGTCTCA 59 Query 80 GTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTAT 139 ||||||||||||| | ||| || ||| || |||| ||| ||||||||||| | || | Sbjct 60 GTCCCAATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAGTCGGCTTGGTAGTCTTT 119 Query 140 TATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTT 178 || ||||||||||||||| ||| | | ||||||| Sbjct 120 TAAACTACCAACTACCTAATCTTACGCAAACTCATCTTT 158 >seq985 Length=4014 Score = 107 bits (118), Expect = 4e-21 Identities = 117/153 (76%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 27 ATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAA 86 ||||| ||| || |||||||||||||| | ||| ||||||||||||||||||||| Sbjct 4007 ATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTTGGGCCGTGTCTCAGTCCCAA 3949 Query 87 TGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCA 146 |||||| | ||| || ||| || |||| ||| | |||||||| | |||||| | | Sbjct 3948 TGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAATAGGCTTGGTAGTCTATTAAATTA 3889 Query 147 CCAACTACC-TAATCGGCCGCGAGCCCATCTTT 178 ||||||||| ||||| ||| | | ||||||| Sbjct 3888 CCAACTACCGTAATCTTGCGCAAACTCATCTTT 3856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998389586688