Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq260 73.4 8e-11 >seq260 Length=11408 Score = 73.4 bits (80), Expect = 8e-11 Identities = 107/150 (71%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 146 CATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCA 205 ||||| |||| ||||| ||||||||||| | ||||||| |||||||||||| ||| Sbjct 7 CATTGTCCAAAATTCCCCACTGCTGCCTTTAAAAA-AGTTTGGGCCGTGTCTCAGTCCCA 65 Query 206 ATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCC 265 |||||| || | | || ||| | | ||| || || |||| ||| | | ||| | Sbjct 66 ATGTGGCTGATCATTCTTTCAAACCAGCTAAAGATAGTCGGCTTGGTAGTCTTTTAAACT 125 Query 266 GCCTACTACCTAATGGAACGCATCCCCATC 295 || |||||||||| ||||| | |||| Sbjct 126 ACCAACTACCTAATCTTACGCAAACTCATC 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068788852416