Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq266 228 2e-57 seq376 224 3e-56 >seq266 Length=5074 Score = 228 bits (252), Expect = 2e-57 Identities = 148/161 (92%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404 |||||||||||||||||||||| ||||||||||| |||||||||||||||| | || || Sbjct 5074 CATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATCGAGTAGACT 5015 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACAT 463 ||||||||| ||||||||||||||||||||||| ||| | | ||| |||||||||||||| Sbjct 5014 ATAACTGATATAATGAGCCATTCGCAGTTTCACAGTACAAAGTTGTTTATACTTAGACAT 4955 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| ||||||||||||||| Sbjct 4954 GCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 4914 >seq376 Length=6520 Score = 224 bits (248), Expect = 3e-56 Identities = 147/161 (91%), Gaps = 1/161 (1%) Strand=Plus/Minus Query 345 CATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACG 404 |||||||||||||||||||||| ||||||||||| |||||||||||||||| | || || Sbjct 6520 CATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATCGAGTAGACT 6461 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGACAT 463 ||||||||| ||||||||||||||||||||||| ||| | | || |||||||||||||| Sbjct 6460 ATAACTGATATAATGAGCCATTCGCAGTTTCACAGTACAAAAGTGTTTATACTTAGACAT 6401 Query 464 GCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| ||||||||||||||| Sbjct 6400 GCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 6360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510384246528