Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20periplocum_20[genbank_20GCA_5F001922765.1_202016-12-28] 1,043 sequences; 35,886,464 total letters Query= NC_031927.1 Length=216121 Score E Sequences producing significant alignments: (Bits) Value seq308 109 8e-19 >seq308 Length=64091 Score = 109 bits (120), Expect = 8e-19 Identities = 256/384 (67%), Gaps = 2/384 (1%) Strand=Plus/Plus Query 162455 TCTACCAAGCGAGCACCAGTGAGCTTTATGGGCTAGTTCAGGAGACACCCCAGAAAGAAA 162514 |||||||||| || || ||||| || || || || | ||| || |||| ||| Sbjct 25333 TCTACCAAGCTTCTACGAGCGAGCTGTACGGCAAAGCGCAAGTGACGCCTCAGAGTGAAC 25392 Query 162515 CCACTCCAATGTATCCACGATCCCCTTATGGAGTTGCTAAACTATATGGGTTCTGGATCA 162574 ||| || | |||||||| || ||||| || || | || | || || ||| |||| Sbjct 25393 TCACGCCGTTCTATCCACGCTCGCCTTACGGGGTCTCAAAGCAATTTGCGTTTTGGAGTG 25452 Query 162575 TCAAAAACTACAGGGAAAGCTATGACATACATGCCTCTAGCGGTATTCTATTCAATCACG 162634 || ||||| | ||| ||| | || | || | || || || |||||||| | Sbjct 25453 TCGTCAACTATCGTGAAGCCTACGGAATGTACGCAGTGAATGGAATACTGTTCAATCATG 25512 Query 162635 AAAGCTCACGCAGAGGAGAGACGTTCGTCACACGCAAGATCGTCCGAGCCTTGTCCCGAA 162694 | || | || |||| || |||||||| ||||||||| || || | ||||| Sbjct 25513 AGAGTCCTCGGCGAGGGCCAACATTCGTCACCCGCAAGATCACACGTGCTGTAGTCCGAA 25572 Query 162695 TT-AGTGTGGGACTCCAAAGTGATCTACAACTTGGAAACCTCAATGCCCGACGTGACTGG 162753 | || || | | | |||| ||| | |||||||||| |||| ||||| ||| Sbjct 25573 TCCAGGCCGGTATTGAAGAGTG-TCTTTACATTGGAAACCTAGATGCAAAGCGTGATTGG 25631 Query 162754 GGACACGCCAAAGACTACGTAGAGGCTATGTGGTTGATGCTTCAGCAAGAGAAGCCAGAT 162813 || |||||||||||||| || ||| |||||| ||| | |||||||| | ||| || Sbjct 25632 GGGCACGCCAAAGACTATGTCGAGTGCATGTGGCGCATGATGCAGCAAGAAACGCCCGAA 25691 Query 162814 GATTATGTGATCGCAACTGGTGAG 162837 |||| ||| |||| || || ||| Sbjct 25692 GATTTTGTCGTCGCTACCGGAGAG 25715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 691450185100680