Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq4107 150 1e-34 seq3561 140 2e-31 seq3245 104 2e-20 >seq4107 Length=10989 Score = 150 bits (166), Expect = 1e-34 Identities = 110/124 (89%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 ||||| || ||||| ||| |||||||||||||||||| | |||||||||||||||| || Sbjct 9364 CCCTAGGGCTACCT-GTTACGACTTCACCCCAGTCATTGACCACAAAGTGGTAAGCGACC 9422 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||||||||||| |||||||||||||||||| || |||||||||||||||| ||||||| Sbjct 9423 -CCCGAAGGTTAGTCTACCTACTTCTTTTGCAGCCAACTCCCATGGTGTGAC-GGCGGTG 9480 Query 135 TGTA 138 |||| Sbjct 9481 TGTA 9484 >seq3561 Length=15242 Score = 140 bits (154), Expect = 2e-31 Identities = 107/124 (86%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 ||||| || ||||||||| |||||| |||| ||||||||||||| ||||| | ||||| Sbjct 2617 CCCTAGGGCTACCTTGTTACGACTTAACCC-AGTCATGAATCACTCCGTGGTGATCGCCC 2675 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| |||||||| |||| | |||||| ||||||||||||||||||||||||||||||| Sbjct 2676 TCC-GAAGGTTAGGCTAACCACTTCTGGAGCAACCCACTCCCATGGTGTGACGGGCGGTG 2734 Query 135 TGTA 138 |||| Sbjct 2735 TGTA 2738 >seq3245 Length=19255 Score = 104 bits (114), Expect = 2e-20 Identities = 103/126 (82%), Gaps = 7/126 (6%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAA-AGTGGTAAGCGCC 73 |||||||| ||||||||| |||||||| |||||||||||| ||||| ||||| | || | Sbjct 7482 CCCTACGGCTACCTTGTTACGACTTCA-CCCAGTCATGAACCACAACCGTGGTGATCGTC 7540 Query 74 CTCCCGAAGGTTAAGCTACCTACTTCTTTTG-CAACCCACTCCCATGGTGTGACGGGCGG 132 |||||||||| || ||| | |||||| | | ||| ||| ||||||||||||||| | Sbjct 7541 CTCCCGAAGG-TAGACTAACCACTTCTGTGGCCAATCCA--TACATGGTGTGACGGGC-G 7596 Query 133 TGTGTA 138 |||||| Sbjct 7597 TGTGTA 7602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345556820520