Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq4457 379 8e-103 seq2843 280 6e-73 seq4286 215 2e-53 seq3262 208 3e-51 seq4075 187 1e-44 seq9559 149 3e-33 seq9191 131 7e-28 seq12231 122 4e-25 seq130 105 3e-20 seq4254 91.5 6e-16 seq1057 86.0 3e-14 seq272 80.6 1e-12 >seq4457 Length=11085 Score = 379 bits (420), Expect = 8e-103 Identities = 493/666 (74%), Gaps = 49/666 (7%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | ||||||||||| |||||| |||||||| || ||| |||||||| | ||||||| Sbjct 7360 TTCTAAGAGTCGAGTTGCTTGGGATTGCAGCTCAAAGCGGGTGGTAAATTCCATCTAAAG 7301 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||| | || ||||||||||||| ||||||| |||| |||||||| |||| ||| Sbjct 7300 CTAAACACGGGTGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGCAAAGAACT 7241 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||||||| || | |||||||| ||||||||||||| | |||||| | Sbjct 7240 TTGAAAAGAGAGTTAAAGAGTGCCTGAAATTGCTGAAAGGGAAGCGAAGGAAACCAGTGT 7181 Query 214 -TGCC--CGCAGTTGCTCAACCGGCCCCTCGG----CCGGTGCAC-TCTTCTGCGGTCAG 265 || | || || | || | ||||||||| | || | | |||||||| || | Sbjct 7180 CTGGCGTCGAAGCTT-TCCCTCTGCCCCTCGGGGCTCTGGGTCGCGTCTTCTGCCGT--G 7124 Query 266 GCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCG--GGAATGTGGCCCC-CTTCGGGG 322 ||||| || | | || | ||| | || | |||| || || | |||||| | Sbjct 7123 GCCAGGGTCGGGTATGGTTGCGGGAGCCTGCCCGCCTCGGAAGGTAACCTCTCTTCGGAG 7064 Query 323 GGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGG 382 | | || ||| || | || | | || ||||| || |||||| Sbjct 7063 G----TGAAGACCGTGGCG---TGTCGTC-GC---GACTGTGG--------CCGGCT--- 7026 Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 ||| || ||||||| | ||||||||| |||||||||||||||||||||||| Sbjct 7025 ---CTGACGAAATGGTTTTCTTTACCCCGTCTTGAAACACGGACCAAGGAGTCTAACATG 6969 Query 443 TATGCGAGTGTTTGGGTGT-CAAACCC-GTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500 |||||| |||||| ||||||| |||||| | |||||||||| | ||||||||| Sbjct 6968 CCCGCGAGTACAGGGGTGTTCAAACCCCGTGCGC--AGTGAAAGTGAATGCAGGTGGGAA 6911 Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG---GATTTGAGTAAGAG 557 ||| ||| |||||||||||||| | ||||| ||| | | ||||||| ||| Sbjct 6910 GCCGCAAGGTGGCACCATCGACCGACC---ATGTCCCCGGGGGCGAGGTTTGAGTGTGAG 6854 Query 558 CATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAA 617 | | |||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 6853 CGTGCATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGGGGAA 6794 Query 618 ACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAG 677 ||||||||||||||||| |||| ||||| |||||||||||||||| | |||||||||||| Sbjct 6793 ACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTGAGATTTGGGTATAG 6734 Query 678 GGGCGA 683 |||||| Sbjct 6733 GGGCGA 6728 >seq2843 Length=29081 Score = 280 bits (310), Expect = 6e-73 Identities = 232/280 (83%), Gaps = 5/280 (2%) Strand=Plus/Minus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT-CAAAC 466 ||||||||| |||||||||||||||||||||||| |||||| |||||| ||||| Sbjct 11807 CCCGTCTTGAAACACGGACCAAGGAGTCTAACATGCCCGCGAGTACAGGGGTGTTCAAAC 11748 Query 467 CCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGAT 526 || | ||| | |||||||||| | ||||||||| ||| ||| |||||||||||||| Sbjct 11747 CCCCGTGCGCAGTGAAAGTGAATGCAGGTGGGAAGCCGCAAGGTGGCACCATCGACCGAC 11688 Query 527 CCTGATGTCTTCGGATG---GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGG 583 | || | | ||| | | ||||||| |||| | |||||||||||||||||||| Sbjct 11687 CATG-TCCCCCCGGGGGCGAGGTTTGAGTGTGAGCGTGCATGTTGGGACCCGAAAGATGG 11629 Query 584 TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTC 643 |||||||||||||||||||| |||||||| ||||||||||||||||||||| |||| ||| Sbjct 11628 TGAACTATGCCTGAATAGGGCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTC 11569 Query 644 TGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||||||||||||||| | |||||||||||||||||| Sbjct 11568 TGACGTGCAAATCGATCGTGAGATTTGGGTATAGGGGCGA 11529 Score = 266 bits (294), Expect = 1e-68 Identities = 238/299 (80%), Gaps = 17/299 (6%) Strand=Plus/Minus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 || || ||||| | | || |||||||||| |||||||||||||||||||||||| | || Sbjct 2172 TGACGAAATGGGTCCATGCAGCCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTG 2113 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| | ||||||||||||| | ||| ||||||||||| | | Sbjct 2112 CGAGTACTCGGGTGTCAAACCCCAGTGCGCAATGAAAGTGACATG--------------G 2067 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCG--GATGGATTTGAGTAAGAGCATAGCT 564 | | ||| || || |||||| ||| ||||| | || |||| ||| ||||||| | | Sbjct 2066 TGCGCGCAGCACCGGCCGATCATGA-GTCTTTGACGAACGATTCGAGCAAGAGCACAAAT 2008 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 ||||||||||||||||||||||||||||||||| |||| |||||||| |||||| |||| Sbjct 2007 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAGGAGGGCGAAGCCAGGGGAAACCCTGG 1948 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||| ||| ||||| |||||||||||||||||||| |||||||||||||||| Sbjct 1947 TGGAGGCTCGCCGCGATTCTGACGTGCAAATCGATCGTCAAACTTGGGTATAGGGGCGA 1889 Score = 237 bits (262), Expect = 7e-60 Identities = 226/283 (80%), Gaps = 7/283 (2%) Strand=Plus/Minus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGT--GTC 462 |||||||||||| ||||||||||||||||||| |||| | ||||||| ||| || Sbjct 15144 CGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCCAGT- 15086 Query 463 AAACCCGTGCG-CGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT-GCACCATCG 520 |||||||| | || || ||| |||| || || | ||| || |||| ||||| || Sbjct 15085 AAACCCGTAAGGCGCAAGGAAGCTGAATGGCGG--GATCCCCATGCGGGTTGCACCGCCG 15028 Query 521 ACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGA 580 ||||| | |||| | | || || || |||| ||||||| |||| ||||||||||||| Sbjct 15027 ACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGA 14968 Query 581 TGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGG 640 ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| Sbjct 14967 TGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGA 14908 Query 641 TTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||| ||||||||||| ||||| | |||||||||||||||| Sbjct 14907 TACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGA 14865 Score = 181 bits (200), Expect = 4e-43 Identities = 135/158 (85%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||||||||||| |||||| |||||||| || |||| |||| || | ||||||||||||| Sbjct 23880 GAGTCGAGTTGCTTGGGAGTGCAGCTCAAAGTGGGTGGTAGATGCCATCTAAAGCTAAAT 23821 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | |||| |||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 23820 AGTGGCAAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGGACTTTGAAA 23761 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 ||||||||||| || | |||||||||| ||||||||| Sbjct 23760 AGAGAGTTAAAGAGTGCTTGAAATTGTTAAAAGGGAAG 23723 Score = 174 bits (192), Expect = 7e-41 Identities = 120/136 (88%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 548 TGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAA 607 |||||| ||| ||| ||||||||||||||||||||||||||||||||||| ||||| || Sbjct 23248 TGAGTATGAGTATACCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAGGAGGGTAAA 23189 Query 608 GCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAAT 667 ||||| ||||||||||||||||||||| | | ||||| |||||||||||||| | | || Sbjct 23188 GCCAGGGGAAACTCTGGTGGAGGCTCGGCGAGATTCTGACGTGCAAATCGATCTTTAGAT 23129 Query 668 TTGGGTATAGGGGCGA 683 || ||||||||||||| Sbjct 23128 TTAGGTATAGGGGCGA 23113 Score = 167 bits (184), Expect = 1e-38 Identities = 136/165 (82%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 ||| ||||||| |||||||||||||||||| | || ||| |||||||| | || || || Sbjct 15531 TCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAATTCCGTCCAAGGC 15472 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| ||| ||||||||||||| ||||||| | || ||||||||||||| |||| Sbjct 15471 TAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTT 15412 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 || ||||||||| |||||| | ||||||||| | ||||||||| Sbjct 15411 TGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTCGGGAGGGAAGCG 15367 Score = 123 bits (136), Expect = 1e-25 Identities = 129/168 (77%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 36 CGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCT 95 ||| |||||| || ||||||||||| || || |||| ||||||| | ||| ||||| Sbjct 2453 CGAAGAGTCGGCATGCTTGGGAATGCATGTCAAATTGGGTGGTAAATCCCATCTGAAGCT 2394 Query 96 AAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 ||||| | | ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 2393 AAATACGGACAGGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGTTGTTT 2334 Query 156 GGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 | |||| | | | ||||| || |||||||| ||| |||||| || || Sbjct 2333 GAAAAG-GCGGTCAAAAGTACCTGAAATTGCTGAGGGGGAAGTGCATG 2287 >seq4286 Length=9999 Score = 215 bits (238), Expect = 2e-53 Identities = 222/290 (77%), Gaps = 14/290 (5%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||||||||||||| || |||||||| | | ||| ||| | Sbjct 5868 CCCGTCTTGAAACACGGACCAAGGAGTCTATCACTAATGCGAGTTTGCGAGTGCAAAAAC 5927 Query 468 -CGTGCGCGTAATGAAAGTGAACGGA-GGTGGGAACCCGTGAGGGT------------GC 513 | | || |||||||||| | | |||| || | |||| | || Sbjct 5928 TCATAGGCTTAATGAAAGTAAGTATAAGGTGCCAAGAGGAGAGGTTCGCCGATCTTCCGC 5987 Query 514 ACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACC 573 | |||||||||| | |||| | || || | || |||||||||||| || | ||||| Sbjct 5988 AGCATCGACCGACCATGATCTTTTGTGAAAGGTTCGAGTAAGAGCATTATTGGTAGGACC 6047 Query 574 CGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTC 633 |||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct 6048 CGAAAGATGGTGAACTATGCTTGAGTAGGGTGAAGCCAGGGGAAACTCTGGTGGAGGCTC 6107 Query 634 GCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | |||| | ||| ||||||||||| |||||||| ||| |||||||||||| Sbjct 6108 GTAGCGATACTGACGTGCAAATCGTTCGTCAAACTTGAGTATAGGGGCGA 6157 Score = 159 bits (176), Expect = 1e-36 Identities = 134/162 (83%), Gaps = 8/162 (5%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||||||||||| |||||| ||||||||||| |||| ||||||||||||||||| Sbjct 5465 GAGTCGGGTTGTTTGGGATTGCAGCCCTAAATGGGAGATAAACTTCTTCTAAAGCTAAAT 5524 Query 100 AT---TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 || ||| || |||||||||| ||||||| |||| ||||| ||||||| |||||| Sbjct 5525 ATCTATGG---GAAACCGATAGCGAACAAGTACTGTGAAGGAAAGGTGAAAAGAACTTTG 5581 Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGC 198 |||||| ||||||| || |||||| ||||| | |||||| Sbjct 5582 AAAAGAGGGTTAAAA--GACTTGAAATCGTTGAGAAGGAAGC 5621 >seq3262 Length=19006 Score = 208 bits (230), Expect = 3e-51 Identities = 219/285 (77%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 402 AAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGT 461 || || ||||||||| |||||||||||||||||||||||| ||| | ||| | | || Sbjct 5931 AATCGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTATACAAGTCTATCTGTTA 5990 Query 462 CAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGT--GCACCATC 519 |||| || ||||||||||||| | | ||| ||| | | | || ||| ||| Sbjct 5991 AAAACAAGTAGGCGTAATGAAAGTAA--GATGGTAAGAAGACTTTACAGTCAGCATTATC 6048 Query 520 GACCGATCCTGATGTCTTCG-GATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAA 578 || | ||| ||| | | | || || |||| ||| || ||| || | |||||||||| Sbjct 6049 GATCAATCTGGATCTTTAAGTGAAAGAATTGAATAATAGTATATATGATAGGACCCGAAA 6108 Query 579 GATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGC 638 ||||||||||||| | ||||||| |||| |||||||||||||| |||||| ||| || Sbjct 6109 GATGGTGAACTATACTTGAATAGAACGAAGACAGAGGAAACTCTGTTGGAGGTTCGAAGG 6168 Query 639 GGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| |||||||||||||| ||||||||| |||||||||||| Sbjct 6169 GGTTCTGACGTGCAAATCGATCTTCAAATTTGAGTATAGGGGCGA 6213 Score = 159 bits (176), Expect = 1e-36 Identities = 134/163 (82%), Gaps = 1/163 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||| |||||||| |||| || || |||||| |||||| Sbjct 5412 GAGTCGGGTTGTTTGGGAATGCAATCTTAAATGGGTGGTATATCTCATCTAAAACTAAAT 5471 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 ||| | ||||||||||||| ||||||| |||| ||||| ||||||| |||||| || Sbjct 5472 ATTAACAAGAGACCGATAGCAAACAAGTACCGTGAGGGAAAGGTGAAAAGAACTTTGAAA 5531 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||| | ||||| || |||||||||| | |||||| ||||| Sbjct 5532 AGAGAG-TGAAAAGTACTTGAAATTGTTAACAGGGAAACGCTT 5573 >seq4075 Length=11175 Score = 187 bits (206), Expect = 1e-44 Identities = 141/166 (85%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAA 97 |||||||| |||||||||||||||| |||| |||| |||||| ||| ||||||||||| Sbjct 4826 ACGAGTCGGTTTGTTTGGGAATGCAGACCTAAGTGGGTGGTAAACTTCATCTAAAGCTAA 4885 Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157 ||| ||| |||||||||||||| ||||||| |||||| |||||||| |||| |||||| Sbjct 4886 ATACCGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGATGCAAAGGACTTTGA 4945 Query 158 AAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG 203 |||||||||||||||| | |||||||||| | ||||||| ||| Sbjct 4946 AAAGAGAGTTAAAAAGAGCTTGAAATTGTTTACGTGGAAGCGATTG 4991 Score = 185 bits (204), Expect = 4e-44 Identities = 233/317 (74%), Gaps = 15/317 (5%) Strand=Plus/Plus Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 |||| || || ||||| | || | ||||||| | |||||||||||||||||||||||| Sbjct 5386 GATGTTGACGAAATGGCTTCAACTGTCCCGTCTAGAAACACGGACCAAGGAGTCTAACAT 5445 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTG--CGCGTAATGAAAGTGAACGGAGG----- 494 |||||||||||| |||| ||||| || |||| ||||||||| || || | Sbjct 5446 GTATGCGAGTGTTAAGGTGGAAAACCTTTGGACGCGCAATGAAAGTAAAGGGCGCAAGCC 5505 Query 495 TG-GGA---ACCCGTGAGG----GTGCACCATCGACCGATCCTGATGTCTTCGGATGGAT 546 || ||| ||||| | || | ||| ||||||||| ||| | | || ||| Sbjct 5506 TGAGGATAGACCCGCGTGGAGCGGCGCATATCCGACCGATCTGGATTTTATATGAAAGAT 5565 Query 547 TTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGA 606 ||||||| ||||||| ||||||||||||||||||||||||||| ||| || ||| |||| Sbjct 5566 TTGAGTATGAGCATACCTGTTGGGACCCGAAAGATGGTGAACTTTGCGTGCGTAGAGTGA 5625 Query 607 AGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAA 666 || | |||||| | |||| |||| | ||||||| |||||||||||||| | Sbjct 5626 AGTCGAGGGAAACCTCGATGGAAGCTCATACAGGTTCTGACGTGCAAATCGATCTGGCGA 5685 Query 667 TTTGGGTATAGGGGCGA 683 || ||| |||||||| Sbjct 5686 CGTGCGTAAAGGGGCGA 5702 >seq9559 Length=846 Score = 149 bits (164), Expect = 3e-33 Identities = 105/120 (88%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 318 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 377 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||| || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 378 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 437 >seq9191 Length=918 Score = 131 bits (144), Expect = 7e-28 Identities = 117/144 (81%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||| ||||||||| |||| || |||||| | | ||||| ||||||| Sbjct 414 GAGTCGGGTTGCTTGAGAATGCAGCCCTAAGCAGGTGGTAAACTCCATCTAAGGCTAAAT 473 Query 100 ATTGGCCA-GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || | ||| ||||||||||||| ||||||| |||| ||||| ||||||| |||||| | Sbjct 474 AT-GACCACGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAA 532 Query 159 AAGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || |||||||| Sbjct 533 GAGAGAGTTCAAGAGTACGTGAAA 556 Score = 87.8 bits (96), Expect = 7e-15 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 405 CGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTG--TC 462 || ||||||||| |||||||||||||||||||||||| | ||||||| ||||| | Sbjct 800 CGACCCGTCTTGAAACACGGACCAAGGAGTCTAACATGTGTGCGAGTCATTGGGCGCACT 859 Query 463 AAACCCGTGCGCGTAATGAAAGTGAACGGAGG 494 |||||| |||||||||||||||| || || Sbjct 860 AAACCCAGAGGCGTAATGAAAGTGAAAGGGGG 891 >seq12231 Length=565 Score = 122 bits (134), Expect = 4e-25 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 284 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 225 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 224 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 165 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 164 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 125 >seq130 Length=533031 Score = 105 bits (116), Expect = 3e-20 Identities = 72/81 (89%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 596 GAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655 ||||||||||||||||| ||| |||||| |||||||||| ||| ||||| ||||||||| Sbjct 384451 GAATAGGGTGAAGCCAGGGGAGACTCTGCTGGAGGCTCGTAGCAATTCTGACGTGCAAAT 384392 Query 656 CGATCGTCAAATTTGGGTATA 676 ||||||| | ||||||||||| Sbjct 384391 CGATCGTGAGATTTGGGTATA 384371 >seq4254 Length=10165 Score = 91.5 bits (100), Expect = 6e-16 Identities = 102/124 (82%), Gaps = 12/124 (10%) Strand=Plus/Minus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 ||||||| ||||||||||||||||||||| ||| ||||| | |||||| |||| |||| Sbjct 3093 TGTTGGG-CCCGAAAGATGGTGAACTATG-CTG-TTAGGGCG-AGCCAGTGGAA--TCTG 3040 Query 624 GTGGAGGC--TCGCAGCG-GTTCTGGCGTGCAAATCGATCGT-CAAATTTGGGTATAGGG 679 |||||||| ||| |||| ||||| ||| || ||||||| || |||||||| ||||| Sbjct 3039 GTGGAGGCTTTCGTAGCGCATTCTGCGCTGC-AACCGATCGTGCAGATTTGGGT-TAGGG 2982 Query 680 GCGA 683 |||| Sbjct 2981 GCGA 2978 >seq1057 Length=163230 Score = 86.0 bits (94), Expect = 3e-14 Identities = 77/94 (82%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 108 GAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATG-AAAAGCACTTTGGAAAGAGAGT 166 ||||||||||||| ||||||| |||| |||||||| | | |||||| ||||||||| Sbjct 96613 GAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGCATATAAACTTTGAAAAGAGAGT 96672 Query 167 T-AAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 | ||| || | |||||||| ||||||||||||| Sbjct 96673 TGAAAGAGTGCCTGAAATTGCTGAAAGGGAAGCG 96706 >seq272 Length=397067 Score = 80.6 bits (88), Expect = 1e-12 Identities = 75/94 (80%), Gaps = 1/94 (1%) Strand=Plus/Minus Query 43 TCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATT 102 |||||||| |||||| ||||||| || ||| |||||||| | |||||||||||| | Sbjct 33493 TCGAGTTGCTTGGGATTGCAGCTAAAAGCGGGTGGTAAATTCCATCTAAAGCTAAACACG 33434 Query 103 GGCCAGAGACCGATAGCGCAC-AAGTAGAGTGAT 135 || ||||||||||||| || ||||| ||||| Sbjct 33433 GGTGGGAGACCGATAGCGAACGAAGTACCGTGAT 33400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079714135850