Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq4750 156 4e-36 seq4604 143 3e-32 seq4587 138 1e-30 seq5238 96.9 4e-18 seq3429 91.5 2e-16 seq8783 86.0 7e-15 seq6825 86.0 7e-15 seq4709 86.0 7e-15 seq6612 82.4 8e-14 seq4107 78.8 1e-12 seq2601 78.8 1e-12 seq5390 77.0 3e-12 seq3950 77.0 3e-12 seq12980 75.2 1e-11 seq7909 75.2 1e-11 seq6130 75.2 1e-11 >seq4750 Length=7679 Score = 156 bits (172), Expect = 4e-36 Identities = 143/175 (82%), Gaps = 7/175 (4%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 |||||||| ||||| || | || |||| ||||||||| ||| ||||||||||||||| Sbjct 7042 CGCAAACG-ACACAGGT-GCCG--TTGAGAATACTAAGGGGCTCAAGTGAATCACGGTTA 7097 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||| | |||||| | || ||||||||||||||||||| || ||| | || ||| || Sbjct 7098 AGGAATTCGGCAAATTAACTCTGTAACTTCGGGATAAAGAGTGCCT--CGAGCAAT-CGA 7154 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||| ||||||| |||||| |||||||| |||||||||| |||| ||| || Sbjct 7155 GGCCGCAGTGAATAGGCCCAGGCGACTGTTTATCAAAAACACATGGCTATGCAAA 7209 >seq4604 Length=8381 Score = 143 bits (158), Expect = 3e-32 Identities = 138/175 (79%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| |||||| | || || || ||| ||| |||||| ||| || || Sbjct 6058 CGTAAACCGACACAGGTAGTCAAGGAGAGAATCCTGAGGTGCTCGAGTGATTCATGGCTA 6117 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 |||||||||||||| | |||||||||||||||| || ||| || ||| | ||||| Sbjct 6118 AGGAACTAGGCAAAATAGCCCTGTAACTTCGGGAGAAGGGGCGCC--CCCTG-TATGGGG 6174 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||| ||| ||| |||||| |||||||| |||||||||| |||||||| || Sbjct 6175 GGCCGCAGTGAAAAGGCCCAGGCGACTGTTTATCAAAAACACATGGCTGTGCGAA 6229 >seq4587 Length=8477 Score = 138 bits (152), Expect = 1e-30 Identities = 140/176 (80%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| ||||||| | || ||| |||||||||| |||||| | || || Sbjct 4806 CGTAAACCGACACAGGTAGTCGAGGAGAGTATCCTAAGGCGCTCGAGTGATCCGTGGCTA 4865 Query 82 AGGAACTAGGCAAACT-GACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||||||||| | ||| | |||||||||||| ||| ||| | ||| | | ||| Sbjct 4866 AGGAACTAGGCAAAATCGACTC-GTAACTTCGGGA-GAAGAGTCGC-CCCCTGTGA-GGG 4921 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||||| ||| ||| |||||| ||||||||||||||||||||| || |||||| Sbjct 4922 GGGCCGCAGTGAAAAGGCCCAGGCGACTGTTTAACAAAAACACAGGACTCTGCCAA 4977 >seq5238 Length=5540 Score = 96.9 bits (106), Expect = 4e-18 Identities = 130/180 (72%), Gaps = 7/180 (4%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | | ||| || |||| |||||||||||| ||| ||| | ||| Sbjct 1526 CAAACCGACACAGGTGGGCAGGTAGAGCATACCAAGGCGCTTGAGAGAACAACGTTGAAG 1467 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA-AGGGTCCCTAC------CCAGAAA 136 ||||| |||||| || || |||||||||||| || |||| || | | | | Sbjct 1466 GAACTCGGCAAAATGCCCTCGTAACTTCGGGAGAAGAGGGACCTCGCATTGGGCAACCAG 1407 Query 137 TGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || | || ||| ||| |||| ||| |||||||| |||||||||||||| ||| || Sbjct 1406 TGAGGGGTGGCACAGAGTAGGGGGTGGCGACTGTTTACTAAAAACACAGGGCTCTGCGAA 1347 >seq3429 Length=16784 Score = 91.5 bits (100), Expect = 2e-16 Identities = 133/180 (74%), Gaps = 16/180 (9%) Strand=Plus/Minus Query 18 GGAGCGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACG 77 ||| || |||| |||||| |||||| | ||| | | ||| |||||| ||| | Sbjct 6038 GGACCGTAAACCGACACAGGTAGTCAAGGAGAAATTTGT-----GCTCGAGTGATTCATG 5984 Query 78 GTTAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAAT 137 | | |||||||||||| | |||||||||||||||| || | | | ||| | || Sbjct 5983 CTAA--GAACTAGGCAAATAG-CCCTGTAACTTCGGGAGAAGGCGCC----CCCTG-TAT 5932 Query 138 GGGAGGGCG-CAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||| ||||| ||| ||| ||| |||||| |||||||| |||||||||| |||||||| || Sbjct 5931 GGG-GGGCGCCAGTGAA-AGGCCCAGGCGACTGTTTATCAAAAACACATGGCTGTGCGAA 5874 >seq8783 Length=1026 Score = 86.0 bits (94), Expect = 7e-15 Identities = 126/179 (70%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| |||| || | ||| || |||||||||| | | ||| |||||||| Sbjct 476 AAACTGACACAGGTAGGCGAGATGAGAATTCTAAGGCGCTCGGGAGAACGGTGGTTAAGG 417 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC-------CCAGAAAT 137 |||| ||||| || ||| |||| |||| ||||| ||| ||| | | | | Sbjct 416 AACTCTGCAAAATGGCCCCGTAAGTTCGCGATAAGGGGCGCCTCCGACGGTTCACGCTGT 357 Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 ||||| | |||| ||| || | | |||||||| |||||||||||| || ||| || Sbjct 356 TGGAGGCCACAGAAAATCGGCTCTAACGACTGTTTATCAAAAACACAGGTCTCTGCTAA 298 >seq6825 Length=2172 Score = 86.0 bits (94), Expect = 7e-15 Identities = 134/194 (69%), Gaps = 21/194 (11%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || ||||||||||| | ||||||| ||||||| Sbjct 37 CAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGATCGAGTGAACTGTGGTTAAG 96 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAG-GGTCC--CTAC----------- 129 ||||| |||||| | | | |||||||||||| || | || || || | Sbjct 97 GAACTCGGCAAAATACCTCCGTAACTTCGGGAGAAGGAGGACCATCTGCTGTGAAGCCCC 156 Query 130 -------CCAGAAATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACA 182 | || |||| || |||||||| ||| ||| || |||||||| ||||||| Sbjct 157 GTGCGGGCTAGCGGTGGGTGGTCGCAGAGACCAGGCCCAAGCGACTGTTTACTAAAAACA 216 Query 183 CAGGGCTGTGCCAA 196 |||| | |||| || Sbjct 217 CAGGTCCGTGCGAA 230 >seq4709 Length=7877 Score = 86.0 bits (94), Expect = 7e-15 Identities = 129/183 (70%), Gaps = 13/183 (7%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | | ||| || |||| |||||||||||| ||| | | ||| Sbjct 7654 CAAACCGACACAGGTGGACAGGTAGAGCATACCAAGGCGCTTGAGAGAACGGTGTTGAAG 7713 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCT----------ACCCAG 133 |||||||||||| | ||| |||||||||||| || ||| ||| | |||| Sbjct 7714 GAACTAGGCAAAATACCCCCGTAACTTCGGGAGAAGGGGGACCTCCATTTGGGCAACCAG 7773 Query 134 AAATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGC 193 ||||| || ||| ||| ||| ||| |||||||| ||||||| ||| || ||| Sbjct 7774 --ATGGG-GGTGGCACAGACCAGGGGGTGGCGACTGTTTACTAAAAACATAGGTCTCTGC 7830 Query 194 CAA 196 || Sbjct 7831 GAA 7833 >seq6612 Length=2472 Score = 82.4 bits (90), Expect = 8e-14 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| ||| || |||||| ||| || |||| ||||| | | ||||| | |||||||| Sbjct 368 AAACCGACTCAGGTAGTCAGGTAGAGAATACCGAGGCGTTCGGGTGAACTATGGTTAAGG 309 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 |||| |||||| || ||| |||||||||||| || ||| Sbjct 308 AACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 271 >seq4107 Length=10989 Score = 78.8 bits (86), Expect = 1e-12 Identities = 79/103 (77%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || | ||| ||| || |||||||||||||| ||| ||| ||| Sbjct 6931 CAAACCGACACAGGTGGATGGGATGAGAATTCTAAGGCGCTTGAGAGAACTCGGGTGAAG 6872 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC 126 |||||||||||| | | | |||||||||||| || | || || Sbjct 6871 GAACTAGGCAAAATAGCACCGTAACTTCGGGAGAAGGTGTGCC 6829 >seq2601 Length=37044 Score = 78.8 bits (86), Expect = 1e-12 Identities = 124/176 (70%), Gaps = 5/176 (3%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || || || || |||||||||||| ||||| ||| | | |||| Sbjct 329 AAACCGACACAGGTGAACGAGTAGAGTATACTAAGGCGATTGAGCGAACAATATTAAAGG 270 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATG----GG 140 |||| |||||| ||| | |||||||||||| || | | ||| | ||||| Sbjct 269 AACTCGGCAAAATGATTCCGTAACTTCGGGAGAAGGAATATCTAAATA-AAATGTTATTT 211 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 || ||| |||||||| || |||||||| ||||||||||| || ||| || Sbjct 210 AGATGGCACAGAATAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCAAA 155 >seq5390 Length=3170 Score = 77.0 bits (84), Expect = 3e-12 Identities = 124/179 (69%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | | ||| || ||||| |||||||||||| ||| | | |||| Sbjct 708 AAACCGACACAGGTGGGCAGGTAGAGTATACCAAGGCGCTTGAGAGAAGTATCCTGAAGG 649 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTAC-------CCAGAAAT 137 |||| |||||| | | | |||||||||||| || | | |||| | | | | Sbjct 648 AACTCGGCAAATTACCTCCGTAACTTCGGGAGAAGGAGGCCCTGCATGAAGGCAACTTTT 589 Query 138 GGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | |||| ||| | | || || |||||||| ||||||||||||||| ||| || Sbjct 588 TGCAGGGGGCACAAGCTGGGGGGTAGCGACTGTTTAGCAAAAACACAGGGCTCTGCTAA 530 >seq3950 Length=12057 Score = 77.0 bits (84), Expect = 3e-12 Identities = 80/105 (76%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| ||||| || | ||| || ||| | |||||||||||| ||| | ||||| Sbjct 7391 CGCAAACCAACACAGGTGGGTGGGGAGAGTATCCCAAGGCGCTTGAGAGAACCCTGGTTA 7332 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC 126 ||||||| |||||| | || | ||||||| |||| || | || || Sbjct 7331 AGGAACTCGGCAAATTAACACCGTAACTTAGGGAGAAGGTGTGCC 7287 >seq12980 Length=518 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || || ||| || |||| |||||||||||| ||| ||| |||| Sbjct 418 AAACCGACACAGGTGATCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGG 477 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||| || Sbjct 478 AACTAGGCAAAATGGTACCGTAACTTCGGGAGAA 511 >seq7909 Length=1341 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || || ||| || |||| |||||||||||| ||| ||| |||| Sbjct 294 AAACCGACACAGGTGATCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTTGGGTGAAGG 235 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||| || Sbjct 234 AACTAGGCAAAATGGTACCGTAACTTCGGGAGAA 201 >seq6130 Length=3286 Score = 75.2 bits (82), Expect = 1e-11 Identities = 73/94 (78%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || || ||| || |||| |||||||||||| ||| ||| |||| Sbjct 2697 AAACCGACACAGGTGATCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAGG 2756 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 ||||||||||| || | |||||||||||| || Sbjct 2757 AACTAGGCAAAATGGTACCGTAACTTCGGGAGAA 2790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531131419258