Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq6130 196 5e-48 seq7909 168 6e-40 seq4107 147 2e-33 seq3950 116 4e-24 seq3245 114 1e-23 seq5238 100 3e-19 seq4587 100 3e-19 seq2601 100 3e-19 seq8783 98.7 9e-19 seq4750 96.9 3e-18 seq6825 93.3 4e-17 seq5390 84.2 2e-14 seq4709 84.2 2e-14 seq233 84.2 2e-14 seq6612 82.4 7e-14 seq5349 80.6 3e-13 seq4604 78.8 9e-13 >seq6130 Length=3286 Score = 196 bits (216), Expect = 5e-48 Identities = 125/136 (92%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 23 GGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAA 82 ||||||||||||| |||| ||| | ||||||| ||||| |||||||||||||||||| Sbjct 2812 GGACTTGCTCCGTGAGCTGATGGCAGTCGAAGTGACCAGTTGGCTGCGACTGTTTATTAA 2871 Query 83 AAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCC 142 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2872 AAACATAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCC 2931 Query 143 GGAAGGTTAATTGATG 158 |||||||||| ||||| Sbjct 2932 GGAAGGTTAAATGATG 2947 >seq7909 Length=1341 Score = 168 bits (186), Expect = 6e-40 Identities = 119/136 (88%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 23 GGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAA 82 |||||||||||||||||| | | ||||||| |||||| ||||| |||||||| ||| Sbjct 179 GGACTTGCTCCGTAAGCTGAGGGGAGTCGAAGTGACCAGGTGGCTGCAACTGTTTACTAA 120 Query 83 AAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCC 142 ||||| |||||||||||||| || || ||| |||||||||||||||||||||||||||| Sbjct 119 AAACATAGCACTCTGCAAACTCGTGAGAGGAAGTATAGGGTGTGACGCCTGCCCGGTGCC 60 Query 143 GGAAGGTTAATTGATG 158 |||||||||||||||| Sbjct 59 GGAAGGTTAATTGATG 44 >seq4107 Length=10989 Score = 147 bits (162), Expect = 2e-33 Identities = 116/138 (84%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 21 AGGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATT 80 || ||||||||| |||| | | ||| | || | | || |||||||||||||||| Sbjct 6816 AGCGACTTGCTCGTGGAGCTGAAGGGGGTTGCAGTGAACTGGTGGCTGCGACTGTTTATT 6757 Query 81 AAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTG 140 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 6756 AAAAACACAGCACTCTGCAAAATCGAAAGATGACGTATAGGGTGTGACGCCTGCCCGGTG 6697 Query 141 CCGGAAGGTTAATTGATG 158 || ||||||||||||||| Sbjct 6696 CC-GAAGGTTAATTGATG 6680 >seq3950 Length=12057 Score = 116 bits (128), Expect = 4e-24 Identities = 105/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 21 AGGGACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATT 80 || ||||||||| ||||| | | ||| | || | ||| | ||||||||||| | Sbjct 7274 AGAGACTTGCTCTCTAAGCGGAAGAGGGTTGCAGTGAAATGGCGGTAGCGACTGTTTACT 7215 Query 81 AAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTG 140 |||||||||| |||||||||| || ||| || ||||||||| |||||||||||||||| Sbjct 7214 AAAAACACAGGACTCTGCAAAGTCGTAAGACGAAGTATAGGGTCTGACGCCTGCCCGGTG 7155 Query 141 CCGGAAGGTTAA 152 |||||||||||| Sbjct 7154 CCGGAAGGTTAA 7143 >seq3245 Length=19255 Score = 114 bits (126), Expect = 1e-23 Identities = 104/122 (85%), Gaps = 13/122 (11%) Strand=Plus/Minus Query 45 CCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTA-AAAACACAGCACTCTGCAAACA 103 |||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||| Sbjct 4949 CCGGTCGAAGATACCAGGCCCCTGCGACTGTTTATTAAAAAACACAGCACTGTGCAAACA 4890 Query 104 CGAAAG-TGGAC-GTATA----GGGTGTGACG-CCTGCCCGGTGCCGGAAGGTTAATTGA 156 |||| | ||||| ||||| ||||||||| |||| || || |||||||||| ||| Sbjct 4889 CGAATGTTGGACGGTATAAGCCCGGTGTGACGCCCTG--CGATG--GGAAGGTTAA-TGA 4835 Query 157 TG 158 || Sbjct 4834 TG 4833 >seq5238 Length=5540 Score = 100 bits (110), Expect = 3e-19 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| ||||||||||| |||||| || || ||| | ||||||||| ||| Sbjct 1380 GCGACTGTTTACTAAAAACACAGGGCTCTGCGAAGCCGCAAGGCGCGGTATAGGGTCTGA 1321 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||||||||||||||| Sbjct 1320 CGCCTGCCCGGTGCCGGAAGGTTAA 1296 >seq4587 Length=8477 Score = 100 bits (110), Expect = 3e-19 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| |||||||||| ||||||| || |||||| || ||||| Sbjct 4936 AGGCCCAGGCGACTGTTTAACAAAAACACAGGACTCTGCCAAATCGAAAGATGAAGTATA 4995 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||| |||| |||||||||||| |||||||||| Sbjct 4996 GGGTCTGACACCTGCCCGGTGCTGGAAGGTTAA 5028 >seq2601 Length=37044 Score = 100 bits (110), Expect = 3e-19 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||||||||||||||| |||||||||| | || || ||||||||| ||| Sbjct 188 GCGACTGTTTATTAAAAACACAGGACTCTGCAAAATTGTAAAATGATGTATAGGGTCTGA 129 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 128 CACCTGCCCGGTGCTGGAAGGTTAA 104 >seq8783 Length=1026 Score = 98.7 bits (108), Expect = 9e-19 Identities = 72/84 (86%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 69 CGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGAC 128 ||||||||||| |||||||||| |||||| |||||| ||||||| |||||| | |||| Sbjct 330 CGACTGTTTATCAAAAACACAGGTCTCTGCTAACACGCAAGTGGATGTATAGAGACTGAC 271 Query 129 GCCTGCCCGGTGCCGGAAGGTTAA 152 |||||||||||| || ||||||| Sbjct 270 GCCTGCCCGGTGTTGGTAGGTTAA 247 >seq4750 Length=7679 Score = 96.9 bits (106), Expect = 3e-18 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| |||||||||||| ||||||||| || |||||| |||||||| || ||||| Sbjct 7168 AGGCCCAGGCGACTGTTTATCAAAAACACATGGCTATGCAAAAACGAAAGTTGAAGTATA 7227 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||| |||||||||||| |||||||||| Sbjct 7228 TGGCCTGACACCTGCCCGGTGCTGGAAGGTTAA 7260 >seq6825 Length=2172 Score = 93.3 bits (102), Expect = 4e-17 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| ||| |||||||| ||||||||||| ||||||||||| | ||| || || Sbjct 176 GGTCGCAGAGACCAGGCCCAAGCGACTGTTTACTAAAAACACAGGTCCGTGCGAAGTCGC 235 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| || ||||| || ||||||||||||||||| |||| ||||| Sbjct 236 AAGACGATGTATACGGACTGACGCCTGCCCGGTGCTGGAACGTTAA 281 >seq5390 Length=3170 Score = 84.2 bits (92), Expect = 2e-14 Identities = 72/89 (81%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA----AAGTGGACGTATAGGGT 123 ||||||||||| |||||||||| |||||| || || ||| |||||||||||| Sbjct 563 GCGACTGTTTAGCAAAAACACAGGGCTCTGCTAAGTCGGCTTCAAGACGACGTATAGGGT 504 Query 124 GTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||||||| ||||||||| Sbjct 503 CTGACGCCTGCCCGGTGCTCGAAGGTTAA 475 >seq4709 Length=7877 Score = 84.2 bits (92), Expect = 2e-14 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||| | ||||||||||| |||||||| || |||||| || || ||| ||||| Sbjct 7789 ACCAGGGGGTGGCGACTGTTTACTAAAAACATAGGTCTCTGCGAAGTCGCAAGACGACGT 7848 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGA 145 |||||| ||||||||||||||||| ||| Sbjct 7849 ATAGGGACTGACGCCTGCCCGGTGCTGGA 7877 >seq233 Length=433802 Score = 84.2 bits (92), Expect = 2e-14 Identities = 74/92 (80%), Gaps = 3/92 (3%) Strand=Plus/Plus Query 70 GACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACG 129 |||||||||||||| || ||| |||||| ||| || || ||| |||||||| |||| Sbjct 22860 GACTGTTTATTAAACACCCAGGTCTCTGCTAACTCGTGAGAGGATGTATAGGGACTGACA 22919 Query 130 CCTGCCCGGTGCCGGAAGGTTAA---TTGATG 158 ||||||||||||||| |||| || |||||| Sbjct 22920 CCTGCCCGGTGCCGGTAGGTGAAGCTTTGATG 22951 >seq6612 Length=2472 Score = 82.4 bits (90), Expect = 7e-14 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 25 ACTTGCTCCGTAAGCTCATGCCGGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAA 84 ||||||| || |||| | || || ||| ||||| | ||||||||||| ||||| Sbjct 251 ACTTGCTTGGTGAGCTGGGGGTGGCCGCAGAGACCAGCGAGAAGCGACTGTTTACTAAAA 192 Query 85 ACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGG 144 |||||| | ||| || || ||| || ||||| || ||||||||||||||||| || Sbjct 191 ACACAGGTCCGTGCGAAGCCGTAAGGCGATGTATACGGACTGACGCCTGCCCGGTGCTGG 132 Query 145 AAGGTTAA 152 || ||||| Sbjct 131 AACGTTAA 124 >seq5349 Length=5186 Score = 80.6 bits (88), Expect = 3e-13 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA-AAGTGGACGTATAGGGTGTG 126 ||||||||||| ||||| || || |||||| || | || |||||||||||| || Sbjct 1992 GCGACTGTTTACTAAAA-CATAGGGCTCTGCGAAGTGGCTAACACGACGTATAGGGTCTG 2050 Query 127 ACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||||||||||||||||||||||| Sbjct 2051 ACGCCTGCCCGGTGCCGGAAGGTTAA 2076 >seq4604 Length=8381 Score = 78.8 bits (86), Expect = 9e-13 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| |||||||||||| ||||||||| || ||| || |||||| || ||||| Sbjct 6188 AGGCCCAGGCGACTGTTTATCAAAAACACATGGCTGTGCGAAATCGAAAGATGAGGTATA 6247 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||| |||||||||||| |||||||||| Sbjct 6248 CAGCCTGACACCTGCCCGGTGCTGGAAGGTTAA 6280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476738442587