Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq12231 176 2e-42 seq4457 86.0 3e-15 seq4075 86.0 3e-15 seq2843 86.0 3e-15 seq2397 80.6 1e-13 seq9191 75.2 5e-12 >seq12231 Length=565 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 505 GGAGAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 446 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||| |||||||||||||||||||||| Sbjct 445 CCGAATCCCCGCCCCGCGGCGGGGCGCGGGACATGTGGCGTA 404 >seq4457 Length=11085 Score = 86.0 bits (94), Expect = 3e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct 7557 GGAAAAGAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 7501 >seq4075 Length=11175 Score = 86.0 bits (94), Expect = 3e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || Sbjct 4614 GGAAAAGAAACTAACAAGGATTCCCTCAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 4670 >seq2843 Length=29081 Score = 86.0 bits (94), Expect = 3e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || Sbjct 24136 GGAAAAGAAACTAACAAGGATTCCCTCAGTAACGGCGAGTGAAGTGGGAAGAGCTCA 24080 Score = 78.8 bits (86), Expect = 4e-13 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||| ||| Sbjct 2698 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCTCAG 2641 Score = 73.4 bits (80), Expect = 2e-11 Identities = 51/58 (88%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58 |||||||||||| || ||||||||| |||||||||||| |||| ||||| ||||||| Sbjct 15734 GGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAG 15677 >seq2397 Length=46228 Score = 80.6 bits (88), Expect = 1e-13 Identities = 52/57 (91%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||| |||||||||||||||||| ||||||||||||||||| ||||||||| || Sbjct 44060 GGAAAATAAACTAACCAGGATTCCCCCAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 44116 >seq9191 Length=918 Score = 75.2 bits (82), Expect = 5e-12 Identities = 53/61 (87%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||| ||| ||||||||| ||||| ||||| ||||| ||||| ||||||||| Sbjct 179 GGAAAAGAAACCAACAGGGATTCCCTTAGTAAGGGCGACTGAACCGGGAAAAGCCCAGCG 238 Query 61 C 61 | Sbjct 239 C 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230371213680