Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4075 385 8e-105 seq4286 367 2e-99 seq3262 360 3e-97 seq7372 351 2e-94 seq2843 351 2e-94 seq10008 141 2e-31 seq379 113 8e-23 seq119 113 8e-23 seq1283 93.3 7e-17 seq6825 84.2 4e-14 seq525 80.6 5e-13 seq4790 78.8 2e-12 seq247 78.8 2e-12 seq4604 73.4 7e-11 seq3950 73.4 7e-11 >seq4075 Length=11175 Score = 385 bits (426), Expect = 8e-105 Identities = 245/265 (92%), Gaps = 1/265 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 7863 TCTTCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 7804 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 7803 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 7744 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 7743 CATCGAAGGATCAAAAAGCAACGTCGCTTTGAACGCTTGGCTGCCACAAGCCAGTTATCC 7684 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA-CTAAAGGATCGATAG 269 ||||||||||||||||| |||||||||| | ||| ||| | | ||||||||||||||| Sbjct 7683 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAACTTCTAAAAATCTAAAGGATCGATAG 7624 Query 270 GCCACACTTTCATGGTTTGTATTCA 294 ||||| |||||| |||||||||||| Sbjct 7623 GCCACTCTTTCAAGGTTTGTATTCA 7599 >seq4286 Length=9999 Score = 367 bits (406), Expect = 2e-99 Identities = 240/263 (91%), Gaps = 1/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 8222 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 8163 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| ||||||||||||| || | | |||||||||||| ||||||||||||||||| Sbjct 8162 TTAGCGGGTGAACAATCCGACACGTTGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 8103 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8102 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 8043 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||||||| | ||| || | | ||||||||||||||| Sbjct 8042 CTGTGGTAACTTTTCTGACACCTCTAGCTTAAAACTTTTAAAG-TTAAAGGATCGATAGG 7984 Query 271 CCACACTTTCATGGTTTGTATTC 293 |||| |||||| ||||||||||| Sbjct 7983 CCACGCTTTCACGGTTTGTATTC 7961 >seq3262 Length=19006 Score = 360 bits (398), Expect = 3e-97 Identities = 242/268 (90%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 8292 GTCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 8233 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||| Sbjct 8232 ATTAGTGGGTGAACAATCCAACACTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCG 8173 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| Sbjct 8172 ACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATC 8113 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAAT-TTCGAGGGA-CTAAAGGATCGAT 267 |||||||||||||||||| |||||||| | || || || || | |||||||||||| Sbjct 8112 CCTGTGGTAACTTTTCTGACACCTCTAACTCCATATCTTGGAATAATTTAAAGGATCGAT 8053 Query 268 AGGCCACACTTTCATGGTTTGTATTCAC 295 |||||| |||||| |||| |||||| Sbjct 8052 AGGCCATGCTTTCACAGTTTAAATTCAC 8025 >seq7372 Length=1670 Score = 351 bits (388), Expect = 2e-94 Identities = 255/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 580 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 639 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct 640 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACACTTGGCG 699 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 700 AATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 759 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 760 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 819 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 820 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 873 >seq2843 Length=29081 Score = 351 bits (388), Expect = 2e-94 Identities = 239/264 (91%), Gaps = 5/264 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 9451 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 9510 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || | ||||||||||||| || ||||||| |||||| ||||||||||||||||||||| Sbjct 9511 TTGGCGGGTGAACAATCCGACACTTACCGTCTTCTGCGGCGGTATGATAGGAAGAGCCGA 9570 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9571 CATCGAAGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 9630 Query 211 CTGTGGTAAC-TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 |||||||||| ||||||| |||||||||| |||| ||| | ||||||||||| ||| Sbjct 9631 CTGTGGTAACTTTTTCTGACACCTCTAGCTTCAA--CCCGAAAG-CTAAAGGATCG-TAG 9686 Query 270 GCCACACTTTCATGGTTTGTATTC 293 |||| |||||| |||||||||| Sbjct 9687 GCCATGCTTTCACAGTTTGTATTC 9710 Score = 318 bits (352), Expect = 1e-84 Identities = 247/294 (84%), Gaps = 9/294 (3%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| | ||||| | | | | ||| ||||||||||||||||||||||||||||| Sbjct 20699 TACTAAGTTGGATTACTGTCGCGACAACGACTCATCAGTAGGGTAAAACTAACCTGTCTC 20758 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||| |||||||||||||||||| || ||| || Sbjct 20759 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTAGTGGGTGAACAATCCTACACTTTGCG 20818 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||| || | | ||||||||||||||||||||| |||||||||||||||||||| Sbjct 20819 TATTCTGCTGCGCAACGGTAGGAAGAGCCGACATCGAAGAATCAAAAAGCAACGTCGCTA 20878 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 20879 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTATGGTAACTTTTCTGACACCTCTAGGT 20938 Query 240 TC--------AAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGT 285 || ||| | | ||||||||||| |||||| ||||||| |||| Sbjct 20939 TCATGCAACAAAAACTGAACCAGCTAAAGGATCGTTAGGCCTCACTTTCGTGGT 20992 Score = 179 bits (198), Expect = 6e-43 Identities = 120/134 (90%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 62 Query 220 CTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTT 279 |||||||| |||||||||| ||||| ||| ||||||||||| ||||||| |||| Sbjct 63 CTTTTCTGACACCTCTAGCGTCAAACCCCGACAAGCTAAAGGATCGTTAGGCCATGCTTT 122 Query 280 CATGGTTTGTATTC 293 || |||||||||| Sbjct 123 CACAGTTTGTATTC 136 >seq10008 Length=770 Score = 141 bits (156), Expect = 2e-31 Identities = 80/81 (99%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 81 ATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 22 Query 93 AGTGGGTGAACAATCCAACGC 113 ||||||||||||||||||||| Sbjct 21 AGTGGGTGAACAATCCAACGC 1 >seq379 Length=344722 Score = 113 bits (124), Expect = 8e-23 Identities = 71/77 (92%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 134 ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTG 193 |||| |||||||||||||||||| || ||||||||||||||||||| ||||||||||| Sbjct 46098 ATGAATGGAAGAGCCGACATCGAATAATAAAAAAGCAACGTCGCTATGCACGCTTGGCTG 46157 Query 194 CCACAAGCCAGTTATCC 210 ||||||||||||||||| Sbjct 46158 CCACAAGCCAGTTATCC 46174 >seq119 Length=547627 Score = 113 bits (124), Expect = 8e-23 Identities = 78/88 (89%), Gaps = 4/88 (5%) Strand=Plus/Plus Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGC----TATGAACGCT 187 || |||||||| ||||||||||||| | |||||||||||||||||| |||||||||| Sbjct 245148 GTCTGATAGGAGGAGCCGACATCGAGGAATCAAAAAGCAACGTCGCTATGTATGAACGCT 245207 Query 188 TGGCTGCCACAAGCCAGTTATCCCTGTG 215 ||||||||| |||||||||||| ||||| Sbjct 245208 TGGCTGCCAGAAGCCAGTTATCGCTGTG 245235 >seq1283 Length=131008 Score = 93.3 bits (102), Expect = 7e-17 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 139 AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197 |||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||| Sbjct 59820 AGGAAGAGCCGACATCGAAGAATCAAGAAGCAACGTCGCTATGAACGCTCGGCTGCCAC 59762 >seq6825 Length=2172 Score = 84.2 bits (92), Expect = 4e-14 Identities = 129/179 (72%), Gaps = 14/179 (8%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| |||| ||||| ||||| Sbjct 1036 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACC 977 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAA--AA 167 ||| ||| | | | || | | ||| || ||||||||||||| | |||| | Sbjct 976 CTTGGGACCTACTCCAGCCCC---AGGATGCGACGAGCCGACATCGAGGTGCCAAACCAT 920 Query 168 GCAACGTCGCTATGAACGCTTGGCTGCCACA--AGCCAGTTATCCCTGTGGTAACTTTT 224 || ||||| |||| || ||||| || | | |||| |||||||| | |||| ||||| Sbjct 919 GC--CGTCGATATGGACTCTTGG--GCAAGATCAGCCTGTTATCCCCGGGGTACCTTTT 865 >seq525 Length=284880 Score = 80.6 bits (88), Expect = 5e-13 Identities = 87/114 (76%), Gaps = 16/114 (14%) Strand=Plus/Minus Query 139 AGGAAGAGCCGACATCGAAGGATCA-AAAAGCAACGTCGCTAT--------GAACGCTTG 189 |||| ||| ||||||||||| |||| ||||| |||||| |||| ||||||||| Sbjct 223153 AGGAGGAGGCGACATCGAAGAATCACAAAAGTAACGTCACTATATATGTAAGAACGCTTG 223094 Query 190 GCTGCCACAAGCCAGT-TAT------CCCTGTGGTAACTTTTCTGGCACCTCTA 236 ||||||||||||||| ||| |||||||| |||||||| |||| ||| Sbjct 223093 ACTGCCACAAGCCAGTGTATATACTCTCCTGTGGTGGCTTTTCTGACACCGCTA 223040 >seq4790 Length=7436 Score = 78.8 bits (86), Expect = 2e-12 Identities = 124/178 (70%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || ||||||||||| |||||| |||||||||||||||| || ||| | || ||||| Sbjct 5702 ACCAACCTGTCTCACGACGGTTTAAACCCAGCTCACGTACCACTTTAATCGGCGAACAGC 5761 Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 | ||| ||| |||| | | | ||| || ||||||||||||| | |||| Sbjct 5762 CGAACCCTTGGGAGCTTCTTCACCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAAC 5821 Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 | || ||||||| ||||| || | | |||| |||||||| ||| ||||| Sbjct 5822 CCCGCCGCCGCTATGGACGCTCGGGCGGGATCAGCCTGTTATCCCCAGAGTACCTTTT 5879 >seq247 Length=422015 Score = 78.8 bits (86), Expect = 2e-12 Identities = 123/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 637 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 696 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | |||| | Sbjct 697 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCTC 753 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| ||||| | ||||| | | |||| |||||||| | ||| ||||| Sbjct 754 CCCGTCGATATGAGCTCTTGGGGGAGATCAGCCTGTTATCCCCGGAGTACCTTTT 808 >seq4604 Length=8381 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 7018 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACC 6959 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| |||| | | | ||| || ||||||||||||| | |||| | Sbjct 6958 CTTGGGACC---TTCTCCAGCCCCAGGATGTGACGAGCCGACATCGAGGTGCCAAACCCC 6902 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||| | ||||| | | |||| |||||||| | ||| ||||| Sbjct 6901 CCCGTCGATGTGAGCTCTTGGGGGAGATCAGCCTGTTATCCCCGGAGTACCTTTT 6847 >seq3950 Length=12057 Score = 73.4 bits (80), Expect = 7e-11 Identities = 122/175 (70%), Gaps = 6/175 (3%) Strand=Plus/Plus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| |||||||||||||| ||| || ||| | || ||||| | ||| Sbjct 6344 CTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCGCTTTAATTGGCGAACAGCCAAACC 6403 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||| | || | | | ||| || ||||||||||||| | |||| | Sbjct 6404 CTTGGGACC---TCCTCCAGCCCCAGGATGCGATGAGCCGACATCGAGGTGCCAAACCTC 6460 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | ||||| ||||| | | ||||| |||||||| | ||| ||||| Sbjct 6461 CCCGTCGATGTGAACTCTTGGGGGAGATAAGCCTGTTATCCCCGGAGTACCTTTT 6515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854286134112