Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq4750 203 4e-50 seq4587 190 2e-46 seq4604 178 1e-42 seq3429 152 6e-35 seq5390 149 7e-34 seq5238 147 2e-33 seq6130 138 1e-30 seq5349 129 6e-28 seq8783 127 2e-27 seq4107 125 8e-27 seq3950 123 3e-26 seq6825 116 4e-24 seq2601 114 1e-23 seq233 95.1 1e-17 seq9671 93.3 5e-17 seq6612 84.2 2e-14 seq2288 77.0 4e-12 >seq4750 Length=7679 Score = 203 bits (224), Expect = 4e-50 Identities = 133/151 (88%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||||||||||| | ||| |||| ||||||||||||||||||||||||||||| Sbjct 7554 CGGGGTCTTTTCGTCCCGTTGCGAGTAACCGGCATCTTCACCGATACTACAATTTCACCA 7495 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 7494 AGCTCACGGTTGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 7435 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 7434 GACAAGGAATTTCGCTACCTTAGGACCGTTA 7404 Score = 113 bits (124), Expect = 5e-23 Identities = 76/90 (84%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7383 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 7324 Query 173 ANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 | ||||||||||||||| Sbjct 7323 ATAGTTACGGCCGCCGTTTACTGGGGCTTC 7294 >seq4587 Length=8477 Score = 190 bits (210), Expect = 2e-46 Identities = 145/180 (81%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||||| | |||||||||||||||||||||||||||| ||||||||| | Sbjct 5243 CGGGGTCTTTCCGTCCCGTTGCGGGTAATCGGCATCTTCACCGATACTTCAATTTCACCG 5184 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct 5183 AGCTCGTGGCCGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCC 5124 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 5123 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 5064 >seq4604 Length=8381 Score = 178 bits (196), Expect = 1e-42 Identities = 142/180 (79%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 ||||||||||||||||| | ||| ||| |||||||||||||| ||||||||||||| | Sbjct 6493 CGGGGTCTTTTCGTCCCGTTGCGAGTACGCGGCATCTTCACCGCGACTACAATTTCACCG 6434 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 |||||| || ||||||| | |||||||||||||||||||||||||||| Sbjct 6433 AGCTCATGGCCGAGACAGTATCCAGATCGTTGCACCATTCGTGCAGGTCGGAACTTACCC 6374 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 6373 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 6314 >seq3429 Length=16784 Score = 152 bits (168), Expect = 6e-35 Identities = 139/180 (77%), Gaps = 3/180 (2%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG-A 83 ||||||||||||||| | ||| ||| || ||||||||||| ||||||||||||| | | Sbjct 5612 GGGTCTTTTCGTCCCGTTGCGAGTACGCG-CATCTTCACCGCGACTACAATTTCACCGGA 5670 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 ||||| || ||||||| | ||||||||||||||||||||||||||||| Sbjct 5671 GCTCATGGCCGAGACAGTGCCCAGATCGTTGCACCATTCGTGCAGGTCGGAACTTACCCG 5730 Query 144 ACAAGGAATTTCGCTA-CCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 |||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 5731 ACAAGGAATTTCGCTACCCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 5790 >seq5390 Length=3170 Score = 149 bits (164), Expect = 7e-34 Identities = 121/151 (80%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||||| || |||||||||| || | | ||||||| ||| Sbjct 271 CGGGGTCTTTCCGTCTAACCGCGGGTACTCCGCATCTTCACGGAGAATTCAATTTCGCTG 330 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 ||| | | ||||||| ||| |||||||||||||||||||||||||| Sbjct 331 AGCATATCCTGGAGACAGTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 390 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||| Sbjct 391 GACAAGGAATTTCGCTACCTTAGGACCGTTA 421 >seq5238 Length=5540 Score = 147 bits (162), Expect = 2e-33 Identities = 120/150 (80%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||| | |||||| | || |||||||||| || | | ||||||| |||| Sbjct 1093 GGGGTCTTTCCGTCTGACCGCGGGAACTCCGCATCTTCACGGAGAATTCAATTTCGCTGA 1152 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 | ||| | ||||||| ||| ||||||||||||||||||||||||||| Sbjct 1153 GTCAACGTTGGAGACAGCGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCG 1212 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||| Sbjct 1213 ACAAGGAATTTCGCTACCTTAGGACCGTTA 1242 >seq6130 Length=3286 Score = 138 bits (152), Expect = 1e-30 Identities = 121/152 (80%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| | ||||||| || | | | ||||||||||| Sbjct 3154 CGGGGTCTTTCCGTCTAGCCGCGGGTACACTGCATCTTAACAGCGATTTCAATTTCACTG 3095 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || ||| || |||||| ||| ||||||||||||||||||||||||| Sbjct 3094 AG-TCTCGGGTGGAGACAGTTTGGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACC 3036 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 3035 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 3004 >seq5349 Length=5186 Score = 129 bits (142), Expect = 6e-28 Identities = 121/153 (79%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 23 CGGGGT-CTTTTCGTCCCATCGCGGGTAATCGGCATCTTCAC-CGATACTACAATTTCAC 80 |||||| |||| |||| | |||||||| || |||||||||| ||| | | ||||||| | Sbjct 2280 CGGGGTACTTTCCGTCTGA-CGCGGGTACTCCGCATCTTCACGCGAGAATTCAATTTCGC 2222 Query 81 TGAGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTAC 140 |||| | | | ||||| | ||| |||||||||||||||||||||||| Sbjct 2221 TGAGTCGATGCTGGAGAC-GTGGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTAC 2163 Query 141 CCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||||| Sbjct 2162 CCGACAAGGAATTTCGCTACCTTAGGACCGTTA 2130 >seq8783 Length=1026 Score = 127 bits (140), Expect = 2e-27 Identities = 114/147 (78%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| | |||||||| |||||||||||| ||||||||||||| | Sbjct 30 CGGGGTCTTTCCGTCTAACCGCGGGTATGTGGCATCTTCACCACAACTACAATTTCACCG 89 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | ||||||||||| ||| || ||| ||||||||||||||||||| Sbjct 90 GGTCGGTGGTTGAGACAGTGCTCCAATCGTTACGCCTTTCATGCAGGTCGGAACTTACCC 149 Query 143 GACAAGGAATTTCGCTACCTTAGGACC 169 ||||||||| ||||||||||||||||| Sbjct 150 GACAAGGAACTTCGCTACCTTAGGACC 176 >seq4107 Length=10989 Score = 125 bits (138), Expect = 8e-27 Identities = 122/155 (79%), Gaps = 6/155 (4%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| |||||||| || |||||| |||| | | ||||||||||| Sbjct 6472 CGGGGTCTTTCCGTCTAGCCGCGGGTATACG-CATCTTAACCGCAATTTCAATTTCACTG 6530 Query 83 AGCTCACGGTTG-AGACAGNNNNNNNNNNNN--TACACCATTCGTGCAGGTCGGAACTTA 139 || || ||| || |||||| ||| ||||||||||||||||||||||| Sbjct 6531 AG-TCTCGGGTGGAGACAGTGTGGCCATCGCGTTACGCCATTCGTGCAGGTCGGAACTTA 6589 Query 140 CCC-GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||| ||||||||||||||||||||||||||||||| Sbjct 6590 CCCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 6624 >seq3950 Length=12057 Score = 123 bits (136), Expect = 3e-26 Identities = 99/121 (82%), Gaps = 2/121 (2%) Strand=Plus/Plus Query 54 GCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTT-GAGACAGNNNNNNNNNNNN 112 |||||||||| | | | ||||||||||||| || ||| | ||||||| Sbjct 6959 GCATCTTCACGGCGATTTCAATTTCACTGAG-TCTCGGGTAGAGACAGCGCCCCCATCGT 7017 Query 113 TACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 172 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7018 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 7077 Query 173 A 173 | Sbjct 7078 A 7078 Score = 73.4 bits (80), Expect = 4e-11 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| ||||||| |||||||||||||||| | | ||||||| ||| Sbjct 6880 CGGGGTCTTTCCGTCTTGCTGCGGGTACTCGGCATCTTCACCGAGAATTCAATTTCGCTG 6939 Query 83 AGCTCACGGTTGAGACAG 100 || | ||||||||||| Sbjct 6940 AGTCCCTGGTTGAGACAG 6957 >seq6825 Length=2172 Score = 116 bits (128), Expect = 4e-24 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| ||||| |||| |||| ||||||| || || | ||||||| | | Sbjct 500 CGGGGTCTTTCCGTCCTGCCGCGCGTAACGAGCATCTTTACTCGTAGTGCAATTTCGCCG 441 Query 83 AGCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 || ||| ||||||| ||| |||||||||||||||||||||||||| Sbjct 440 AGTCTGTGGTCGAGACAGCGCCCAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCC 381 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||| |||| Sbjct 380 GACAAGGAATTTCGCTACCTTAGGATGGTTA 350 >seq2601 Length=37044 Score = 114 bits (126), Expect = 1e-23 Identities = 117/153 (76%), Gaps = 8/153 (5%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAAT---CGGCATCTTCACCGATACTACAATTTCACT 81 ||||||||||||| | || |||| | |||||||||| || | | |||||| | Sbjct 36511 GGGTCTTTTCGTC---TAGCCATTAATACTCCGCATCTTCACGGAAAATTTAATTTCGAT 36567 Query 82 GAGCTCACGGTT-GAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTAC 140 ||| ||| || ||||||| |||||||||| ||||||||||||||||| Sbjct 36568 GAG-TCAATATTAGAGACAGTAGGGCAGTCGTTACACCATTCATGCAGGTCGGAACTTAC 36626 Query 141 CCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||||| Sbjct 36627 CCGACAAGGAATTTCGCTACCTTAGGACCGTTA 36659 Score = 91.5 bits (100), Expect = 2e-16 Identities = 50/50 (100%), Gaps = 0/50 (0%) Strand=Plus/Plus Query 124 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 50 >seq233 Length=433802 Score = 95.1 bits (104), Expect = 1e-17 Identities = 80/100 (80%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 73 AATTTCACTGAGCTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTC 131 |||||||||||| || | |||| |||||| ||||| |||| ||| |||| Sbjct 23097 AATTTCACTGAG-TCCCTGTTGGAGACAGAGGGGAAGTCGTTACACTATTCATGCGGGTC 23039 Query 132 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||||||||||||||||||||||||| ||||||| Sbjct 23038 GGAACTTACCCGACAAGGAATTTCGCTACCTTCGGACCGT 22999 >seq9671 Length=825 Score = 93.3 bits (102), Expect = 5e-17 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 54 GCATCTTCACCGATACTACAATTTCACTGAGCTCACGGTTGAGACAGNNNNNNNNNNNNT 113 |||||||||| | || | |||||||| || | | | ||||||| | Sbjct 647 GCATCTTCACGGGTAATTCAATTTCATGGAAATAATTTTGGAGACAGCGGAGCAGTCGTT 588 Query 114 ACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||| ||| || ||||||||||||| ||||||||||||||||||||||||||| Sbjct 587 ACACCATTCATGCGGGACGGAACTTACCCGCCAAGGAATTTCGCTACCTTAGGACCGT 530 >seq6612 Length=2472 Score = 84.2 bits (92), Expect = 2e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Plus Query 123 GTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1 GTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTA 51 >seq2288 Length=51584 Score = 77.0 bits (84), Expect = 4e-12 Identities = 105/148 (71%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||||| | || | |||||||||| | | | ||||||||||| | Sbjct 34522 GGGTCTTTCCGTCCCGCCATAAATATTACGCATCTTCACGTAAAATGCAATTTCACTG-G 34464 Query 85 CTCACGGTTG-AGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 ||| ||| |||||| ||| |||||| ||| |||| ||||| | Sbjct 34463 ATCAATTTTGGAGACAGTGGGGAAGTCGTTACGCCATTCATGCGGGTCAATACTTAATTG 34404 Query 144 ACAAGGAATTTCGCTACCTTAGGACCGT 171 |||||||||||||||||||||||||||| Sbjct 34403 ACAAGGAATTTCGCTACCTTAGGACCGT 34376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547129353573