Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= AAMG01002110.1 Length=382 Score E Sequences producing significant alignments: (Bits) Value seq3441 105 1e-20 >seq3441 Length=16597 Score = 105 bits (116), Expect = 1e-20 Identities = 166/230 (72%), Gaps = 12/230 (5%) Strand=Plus/Minus Query 150 CTGACTTCCAGCATGCGTGCCAGGTTCTCGGCGCGCTCCAGGTAACGCGACATCCAATAC 209 ||||| || |||||||| || |||||| || || || | | | ||||||||||||||| Sbjct 10639 CTGACGTCGAGCATGCGCGCGGTGTTCTCCGCCCG-TCGACGAAGCGCGACATCCAATAC 10581 Query 210 AGATCTGCAGCTGTTCTACGCAGCATACTCAGCCCTCCACCACCCAGGTGTCCTTGGTTC 269 || | | || || | | |||| |||| |||| |||||||| |||||| | Sbjct 10580 AGGTTCTCTGCGGTCCGGCTGAGCA---TCAGTGATCCAAGACCCAGGTATCCTTGACAC 10524 Query 270 CACCGCCTTGCGACGAGTTGACGACCAGCGAGCCTTCCTTCAGCGCCACGCGGGTCAAGC 329 | || || |||||||| |||||||| | |||||||||| ||||| | |||||| ||| Sbjct 10523 CGCCACCCTGCGACGATTTGACGACGA-CGAGCCTTCCCGCAGCG-GGCCCGGGTC-AGC 10467 Query 330 CACCGGGCACCAGGCGGGTTTC---CTTGCCCGAGAGCACGAAGGGTCGC 376 | |||||||| | ||| || || ||| || || |||||||| ||| Sbjct 10466 CGCCGGGCAC--GACGGACGTCCGTCTCGCCGGACAGGACGAAGGGACGC 10419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1119850737600