Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq436 87.8 1e-12 seq85 86.0 5e-12 >seq436 Length=314818 Score = 87.8 bits (96), Expect = 1e-12 Identities = 91/118 (77%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 61269 GCAG-GAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGA 61327 |||| ||| | || |||| ||||| || ||||||||||| |||||||| || || |||| Sbjct 91777 GCAGCGAGATCCAGCTGTCCGAGGCTCGGTGTTTCTACGGGTTCCAGATCGCGATCGAGA 91836 Query 61328 ATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGA 61385 | ||||| ||| | ||||| |||||||||| || ||| ||| |||| |||||| Sbjct 91837 ACATCCACAGCGAGGTCTACAGCCTTCTCATCGACACCTACGTCAAGGAGGCGGCGGA 91894 Score = 84.2 bits (92), Expect = 2e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Plus Query 61090 TGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCC 61149 |||| |||||||| |||||||| ||| ||||||||||| |||||| |||| || | Sbjct 91119 TGGCAAATGTACAAGAAGGCGGAGGCTAGCTTCTGGACGGCAGAGGAGCTCGACCTGGCG 91178 Query 61150 AAAGACATGAATGACTGGGAGCG-TTTATCGAGCGGTGAACAACATTTCATTAAACATGT 61208 | ||| || ||||||||| | | | ||| || || | ||| ||| | || || || Sbjct 91179 CACGACTACAAGGACTGGGAGAGCCTCACCGA-CGACGAGCGACACTTCGTGAAGCACGT 91237 Query 61209 GTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAG 61248 |||||| ||||| || || ||||| ||||| || ||| Sbjct 91238 GTTGGCTTTCTTCGCTGCCAGCGACGGCATCGTTAACGAG 91277 >seq85 Length=604401 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 66034 TATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGT 66093 || |||||| || |||| ||||||| ||||||||||| ||||| | || || Sbjct 522796 TACCTCGTCGGGGTCGGTGTACTCGATGATTTCGGTGCAGAGATTGGACGATTTGATCGT 522737 Query 66094 GCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGT 66153 ||||| |||| || || ||||||| ||||| || |||||| | | ||||||||| || Sbjct 522736 GCCCAGGTTCTTCTGGTTGCTCTTGCTGTTGCACGCGTCCTTGAAAAGCATGTACGGCGT 522677 Query 66154 GCCGGTCTCAAC 66165 || |||||||| Sbjct 522676 CCCCGTCTCAAC 522665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397503425887280