Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharina_20japonica_20[genbank_20GCA_5F000978595.1_202015-04-22] 13,327 sequences; 543,425,876 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1903 107 8e-18 >seq1903 Length=75883 Score = 107 bits (118), Expect = 8e-18 Identities = 141/192 (73%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 351090 CGTGGCCGTTGGTCTCGTCTCCGTCAAAGTCGGCGTTGTAGGGCTGGGTGACCGACGGGT 351149 ||||| ||| |||| |||||||| |||||||||||||||||| || |||||| | | Sbjct 45216 CGTGGAGGTTCATCTCATCTCCGTCGAAGTCGGCGTTGTAGGGCGACGTCACCGACAGAT 45157 Query 351150 TGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCT-CACGCGGTGCACCATGATGGACCCG 351208 | || | || ||| | || | | || ||| |||||||||| ||||||||||| Sbjct 45156 TCATCCGGAACGTGGA--CCAGTCGA--GCACCTTCACGCGGTGCCCCATGATGGACATC 45101 Query 351209 TTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCTCC 351268 |||||||| | ||||| || ||| | ||| | |||| | || | |||||||| |||| Sbjct 45100 TTGTGGAGGGACGGCTGCCGGTTGAACACGATCACGTCGTCGTCCCTCAAGTGCCGCTCC 45041 Query 351269 ACCTTGTCGCCG 351280 ||| || |||| Sbjct 45040 ACCGCGTAGCCG 45029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084374543933946