Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945. 1_202015-01-15] 322 sequences; 39,089,698 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq121 114 2e-23 >seq121 Length=12206 Score = 114 bits (126), Expect = 2e-23 Identities = 95/116 (82%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||||||||| ||||| ||| || |||||| |||||| ||||||| | ||||||| ||| Sbjct 6192 GATAGGGACCAAACTGCCTCACGGCGTTCTAAACCCAACTCGCGTAACGCTTTAATCGGC 6133 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||||||| |||||||| ||||||| |||| |||| || | ||| |||||||| Sbjct 6132 GAACAGCCAAACCCTTGAAACCTACTACAGCTTCAGGTTGCGTTGAGTCGACATCG 6077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780797564392