Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Schizochytrium_20sp._20CCTCC_20M209059_20[genbank_20GCA_5F000818945. 1_202015-01-15] 322 sequences; 39,089,698 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq121 91.5 5e-16 >seq121 Length=12206 Score = 91.5 bits (100), Expect = 5e-16 Identities = 109/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 139 TAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGT 198 |||| |||||||||||| |||||||||| |||||||||||| | ||||| |||||||||| Sbjct 4609 TAGGAGTGAAAGGCTAATCAAACTTGGATATAGCTGGTTCTTTGCGAAATCTATTTAGGT 4668 Query 199 AGTGCCTCAAGTATCACCATCGGGGGTAGAGCACTGTTATGGCTAGGGGGTCATTGCGAC 258 || | | || | | | |||||||||| |||||| | |||||| | | | | Sbjct 4669 AGAGTGTAAAACACATCTTTTAGGGGTAGAGCTCTGTTAAAGGAAGGGGG-CTTAG---C 4724 Query 259 TTACCAAACCATTGCAAACTCCGAAT 284 |||| | ||||||||| ||||| Sbjct 4725 TTACTGACTTTTTGCAAACTACGAAT 4750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689594559488