Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq20799 313 4e-83 seq1902 313 4e-83 seq20524 304 2e-80 seq19046 304 2e-80 seq21458 302 7e-80 seq13329 291 1e-76 seq13571 288 2e-75 seq11245 163 5e-38 seq10793 163 5e-38 seq3835 158 2e-36 seq9847 147 3e-33 >seq20799 Length=16889 Score = 313 bits (346), Expect = 4e-83 Identities = 222/250 (89%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2550 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 2609 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCA---GCC-ACCAACC 128 ||||||| |||| | || | |||| ||||| ||||||||| ||| ||| ||||| Sbjct 2610 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCATCTAAGAAGTCCACACGCCTACCAAAA 2669 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || | || |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 2670 ATGGTAAACGGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 2729 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2730 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 2789 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 2790 TCAATCTGTC 2799 >seq1902 Length=8552 Score = 313 bits (346), Expect = 4e-83 Identities = 222/250 (89%), Gaps = 7/250 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7477 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 7418 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCA---GCC-ACCAACC 128 ||||||| |||| | || | |||| ||||| ||||||||| ||| ||| ||||| Sbjct 7417 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCATCTAAGAAGTCCACACGCCTACCAAAA 7358 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || | || |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 7357 ATGGTATACGGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 7298 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7297 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTC 7238 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 7237 TCAATCTGTC 7228 >seq20524 Length=18870 Score = 304 bits (336), Expect = 2e-80 Identities = 220/250 (88%), Gaps = 7/250 (3%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 14418 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 14477 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCA---GCC-ACCAACC 128 ||||||| |||| | || | |||| ||||| ||||||||| ||| ||| || || Sbjct 14478 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCATCTAAGAAGTCCACACGCCTACAAAAA 14537 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || | || |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 14538 ATGGTAAACGGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 14597 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 14598 AATCACTCCACCAACTAAGAACGGCCATGCACAACCACCCATAGAATCAAGAAAGAGCTC 14657 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 14658 TCAATCTGTC 14667 >seq19046 Length=8721 Score = 304 bits (336), Expect = 2e-80 Identities = 220/250 (88%), Gaps = 7/250 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 7551 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATGACAGACCTGTTATTGCCTC 7492 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCA---GCC-ACCAACC 128 ||||||| |||| | || | |||| ||||| ||||||||| ||| ||| ||||| Sbjct 7491 CAACTTCCTTTGGTTTGATTACCCAAAAGTCCATCTAAGAAGTCCACACGCCTACCAAAA 7432 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || | || |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 7431 ATGGTAAACGGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 7372 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 7371 AATCACTCCACCAACTAAGAACGGCCATGCACCCCCACCCATAGAATCAAGAAAGAGCTC 7312 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 7311 TCAATCTGTC 7302 >seq21458 Length=12273 Score = 302 bits (334), Expect = 7e-80 Identities = 221/251 (88%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGG-CATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 11352 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGGCATCACAGACCTGTTATTGCCT 11293 Query 75 CAAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCA---GCC-ACCAAC 127 | ||||||| |||| | || | |||| ||||| ||||||||| ||| ||| ||||| Sbjct 11292 CCAACTTCCTTTGGTTTGATTACCCAAAAGTCCATCTAAGAAGTCCACACGCCTACCAAA 11233 Query 128 CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 || || | || |||||||||| | ||| ||||||||||| ||||||||||||||| Sbjct 11232 AATGGTAAACGGAACTATTTAGCACGCGGAGGCCTCGTTCGTTAACGGAATTAACCAGAC 11173 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11172 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 11113 Query 248 ATCAATCTGTC 258 |||||||||| Sbjct 11112 CTCAATCTGTC 11102 >seq13329 Length=2281 Score = 291 bits (322), Expect = 1e-76 Identities = 213/243 (88%), Gaps = 7/243 (3%) Strand=Plus/Plus Query 23 AGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 82 || |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 948 AGTGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGACTCCAACTTC 1007 Query 83 CATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCA---GCC-ACCAACCATAGTCG 135 | |||| | || | |||| ||||| ||||||||| ||| ||| ||||| || || Sbjct 1008 CTTTGGTTTGATTACCCAAAAGTCCATCTAAGAAGTCCACACGCCTACCAAAAATGGTAA 1067 Query 136 ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 | || |||||||||| | ||||||||||||||| ||||||||||||||||||||||| Sbjct 1068 ACGGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCACT 1127 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1128 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAATCT 1187 Query 256 GTC 258 ||| Sbjct 1188 GTC 1190 >seq13571 Length=15900 Score = 288 bits (318), Expect = 2e-75 Identities = 217/250 (87%), Gaps = 8/250 (3%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 6530 TCAGTGTAGCGCGCGTGCG-CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 6588 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCA---GCC-ACCAACC 128 ||||| | |||| | || | |||| ||||| ||||||||| ||| ||| ||||| Sbjct 6589 CAACTTTCTTTGGTTTGATTACCCAAAAGTCCATCTAAGAAGTCCACATGCCTACCAAAA 6648 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACA 188 || || | || |||||||||| | ||||||||||||||| |||||||||||||||| Sbjct 6649 ATGGTAAACGGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGAATTAACCAGACA 6708 Query 189 AATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTA 248 |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 6709 AATCACTCCATAAACTAAGAACGGCCATGCACCACCACGCATAGAATCAAGAAAGAGCTC 6768 Query 249 TCAATCTGTC 258 |||||||||| Sbjct 6769 TCAATCTGTC 6778 >seq11245 Length=13484 Score = 163 bits (180), Expect = 5e-38 Identities = 93/95 (98%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 164 GTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 223 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5253 GTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 5312 Query 224 CACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| |||||||||| Sbjct 5313 CACCCATAGAATCAAGAAAGAGCTCTCAATCTGTC 5347 Score = 127 bits (140), Expect = 3e-27 Identities = 97/117 (83%), Gaps = 11/117 (9%) Strand=Plus/Minus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| | | ||||||||||||||| ||| |||||||||| |||||||||||||| Sbjct 5218 CTATTTAGTACGCGGAGGTCTCGTTCGTTAACGGGATTAACCAGATAAATCACTCCACCA 5159 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 5158 ACTAAGAACG-----------CCACCCATAGAATCAAGAAAGAGCTCTCAATCTGTC 5113 >seq10793 Length=63742 Score = 163 bits (180), Expect = 5e-38 Identities = 96/100 (96%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 23197 GTCTCGTTCGTTAATGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 23138 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||||||||||||| | |||||||| Sbjct 23137 ACCACCACCCATAGAATCAAGAAAGAGCTCTTAATCTGTC 23098 >seq3835 Length=21566 Score = 158 bits (174), Expect = 2e-36 Identities = 90/92 (98%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 164 GTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 223 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15769 GTTCGTTAACGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 15710 Query 224 CACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||||||||||||||||||||||| ||||||| Sbjct 15709 CACCCATAGAATCAAGAAAGAGCTCTCAATCT 15678 Score = 127 bits (140), Expect = 3e-27 Identities = 97/117 (83%), Gaps = 11/117 (9%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 |||||||| | | ||||||||||||||| ||| |||||||||| |||||||||||||| Sbjct 15804 CTATTTAGTACGCGGAGGTCTCGTTCGTTAACGGGATTAACCAGATAAATCACTCCACCA 15863 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct 15864 ACTAAGAACG-----------CCACCCATAGAATCAAGAAAGAGCTCTCAATCTGTC 15909 >seq9847 Length=66103 Score = 147 bits (162), Expect = 3e-33 Identities = 136/168 (81%), Gaps = 7/168 (4%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 40486 TCAGTGTAGCGCGCGTGCGGTCCAGAACATCTAAGAGCATCACAGACCTGTTATTGCCTC 40545 Query 76 AAACTTCCATTGGCTGGA--AGCCAATAGTCCCTCTAAGAAG-CCA---GCC-ACCAACC 128 |||| || |||| | || | |||| | || ||||||||| ||| ||| ||||| Sbjct 40546 CAACTCCCTTTGGTTTGATTACCCAAAAAGCCATCTAAGAAGTCCACACGCCTACCAAAA 40605 Query 129 ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176 || || | || |||||||||| | ||||||||||||||| |||| Sbjct 40606 ATGGTAAACGGAACTATTTAGCACGCGGAGGTCTCGTTCGTTAACGGA 40653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796593238866