Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq21458 82.4 5e-14 seq20799 82.4 5e-14 seq19046 82.4 5e-14 seq13571 82.4 5e-14 seq1902 82.4 5e-14 seq20524 77.0 2e-12 seq13329 77.0 2e-12 >seq21458 Length=12273 Score = 82.4 bits (90), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 || || |||| || |||| || ||||||| ||||||||||| ||||||||||||||| Sbjct 11556 AATTTTTCACCGAGTCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAGGGCAG 11499 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| Sbjct 11498 GGACGTAAT-CAACGCAAGCT 11479 >seq20799 Length=16889 Score = 82.4 bits (90), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 || || |||| || |||| || ||||||| ||||||||||| ||||||||||||||| Sbjct 2346 AATTTTTCACCGAGTCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAGGGCAG 2403 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| Sbjct 2404 GGACGTAAT-CAACGCAAGCT 2423 >seq19046 Length=8721 Score = 82.4 bits (90), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 || || |||| || |||| || ||||||| ||||||||||| ||||||||||||||| Sbjct 7755 AATTTTTCACCGAGTCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAGGGCAG 7698 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| Sbjct 7697 GGACGTAAT-CAACGCAAGCT 7678 >seq13571 Length=15900 Score = 82.4 bits (90), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 ||||| ||||| || |||| || ||||||| ||||||||||| ||||||||| ||||| Sbjct 6326 AAGTTTTCACTGAGTCATT-CAATCGGTAGGT-GCGACGGGCGGCGTGTACAAACGGCAG 6383 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| |||| |||||| Sbjct 6384 GGACGTAAT-CAACACAAGCT 6403 >seq1902 Length=8552 Score = 82.4 bits (90), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 3/81 (4%) Strand=Plus/Minus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 || || |||| || |||| || ||||||| ||||||||||| ||||||||||||||| Sbjct 7681 AATTTTTCACCGAGTCATT-CAATCGGTAGGT-GCGACGGGCGGCGTGTACAAAGGGCAG 7624 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| Sbjct 7623 GGACGTAAT-CAACGCAAGCT 7604 >seq20524 Length=18870 Score = 77.0 bits (84), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 || || |||| || |||| || ||||||| ||||||||||| ||||||||||||||| Sbjct 14214 AATTTTTCACCGAGTCATT-CAATCGGTAGGT-GCGACGGGCGGTGTGTACAAAGGGCAG 14271 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||| ||||||| Sbjct 14272 GGACGTAAT-CAAAGCAAGCT 14291 >seq13329 Length=2281 Score = 77.0 bits (84), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 3/81 (4%) Strand=Plus/Plus Query 44 AAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAG 103 || || |||| || |||| || ||||||| ||||||||| | ||||||||||||||| Sbjct 742 AATTTTTCACCGAGTCATT-CAATCGGTAGGT-GCGACGGGCAGTGTGTACAAAGGGCAG 799 Query 104 GGACGTAATACAACGCAAGCT 124 ||||||||| ||||||||||| Sbjct 800 GGACGTAAT-CAACGCAAGCT 819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300724463480