Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq20799 136 4e-30 seq19046 136 4e-30 seq21458 132 5e-29 seq1902 132 5e-29 seq13329 127 2e-27 seq20524 125 7e-27 seq13571 120 3e-25 seq10432 120 3e-25 seq11245 114 1e-23 seq3835 114 1e-23 seq24020 96.9 4e-18 seq2915 96.9 4e-18 seq1303 96.9 4e-18 >seq20799 Length=16889 Score = 136 bits (150), Expect = 4e-30 Identities = 140/179 (78%), Gaps = 8/179 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| |||||||||||||| ||| ||||||||| ||||||| |||||||||| ||| Sbjct 3291 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACATTAGCAT 3232 Query 70 GGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||| || | || | |||||||||| ||||| | || | ||||| Sbjct 3231 GGAATAATAAGATATGACCTTGATGGTCTATTTTGTTGGTTT---GCACATCAAGGTAAT 3175 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| |||| ||| ||| |||||| | |||| | |||| ||||||||||||||||| Sbjct 3174 GATTAATAGGGACAGTTGGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 3116 >seq19046 Length=8721 Score = 136 bits (150), Expect = 4e-30 Identities = 140/179 (78%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| |||||||||||||| ||| ||||||||| ||||||| |||||||||| ||| Sbjct 6810 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACATTAGCAT 6869 Query 70 GGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||| || | || | |||||||||| ||||| | || | ||||| Sbjct 6870 GGAATAATAAGATATGACCTTGATGGTCTATTTTGTTGGTTT---GCACATCAAGGTAAT 6926 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| |||| ||| ||| |||||| | |||| | |||| ||||||||||||||||| Sbjct 6927 GATTAATAGGGACAGTTGGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 6985 >seq21458 Length=12273 Score = 132 bits (146), Expect = 5e-29 Identities = 139/179 (78%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| |||||||||||||| ||| ||||||||| ||||||| |||||||||| ||| Sbjct 10610 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACATTAGCAT 10669 Query 70 GGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||| || | || | |||||||||| |||| | || | ||||| Sbjct 10670 GGAATAATAAGATATGACCTTGATGGTCTATTTTGTTTGTTT---GCACATCAAGGTAAT 10726 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| |||| ||| ||| |||||| | |||| | |||| ||||||||||||||||| Sbjct 10727 GATTAATAGGGACAGTTGGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 10785 >seq1902 Length=8552 Score = 132 bits (146), Expect = 5e-29 Identities = 139/179 (78%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| |||||||||||||| ||| ||||||||| ||||||| |||||||||| ||| Sbjct 6736 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACATTAGCAT 6795 Query 70 GGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||| || | || | |||||||||| |||| | || | ||||| Sbjct 6796 GGAATAATAAGATATGACCTTGATGGTCTATTTTGTTTGTTT---GCACATCAAGGTAAT 6852 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| |||| ||| ||| |||||| | |||| | |||| ||||||||||||||||| Sbjct 6853 GATTAATAGGGACAGTTGGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 6911 >seq13329 Length=2281 Score = 127 bits (140), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 8/179 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| |||||||||||||| ||| ||||||||| ||||||| |||||||||| ||| Sbjct 1681 TTTACTGTGAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACATTAGCAT 1622 Query 70 GGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||| || | || | |||||||| | ||||| | || | ||||| Sbjct 1621 GGAATAATAAGATATGACCTTGATGGTCTATTTTTTTGGTTT---GCACATCAAGGTAAT 1565 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| |||| ||| ||| ||||| | |||| | |||| ||||||||||||||||| Sbjct 1564 GATTAATAGGGACAGTTTGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 1506 >seq20524 Length=18870 Score = 125 bits (138), Expect = 7e-27 Identities = 139/180 (77%), Gaps = 9/180 (5%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAA-TTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCA 68 |||||| |||||||| |||||| ||| ||||||||| ||||||| |||||||||| || Sbjct 15160 TTTACTGTGAAAAAAATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACATTAGCA 15101 Query 69 TGGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAA 126 |||||||||| ||| ||| | | | |||||||||| ||||| | || | | ||| Sbjct 15100 TGGAATAATAAGATATGACCTTGATGGTCTATTTTGTTGGTTT---GCACATCAAGGTAA 15044 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 |||| |||| ||| ||| ||||| | |||| | |||| ||||||||||||||||| Sbjct 15043 TGATTAATAGGGACAGTTGGGGGGATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 14984 >seq13571 Length=15900 Score = 120 bits (132), Expect = 3e-25 Identities = 137/179 (77%), Gaps = 9/179 (5%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| |||||| ||| ||| ||| ||||||||| ||| ||| |||||||||| ||| Sbjct 7269 TTTACTGTGAAAACATTGGAGTGTTTAAAGCAGGCGTTT-CTCATTGAATACATTAGCAT 7211 Query 70 GGAATAATAGAATAGGACGT-GCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAAT 127 ||||||||| ||| ||| | | | |||||||||| ||||| | || | | |||| Sbjct 7210 GGAATAATAAGATATGACCTTGATGGTCTATTTTGTTGGTTT---GCACATCAAGGTAAT 7154 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| |||| ||| ||| |||||| | |||| | |||| ||||||||||||||||| Sbjct 7153 GATTAATAGGGACAGTTGGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 7095 >seq10432 Length=14493 Score = 120 bits (132), Expect = 3e-25 Identities = 137/179 (77%), Gaps = 10/179 (6%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| ||||||| |||||| ||| ||||| ||| ||||||| |||||||||| ||| Sbjct 6779 TTTACTGTGAAAAA-TTAGAGTGTTTAAAGCTGGCGTTTGCTCATTGAATACATTAGCAT 6721 Query 70 GGAATAATAGAATAGGACGTGCG-GTTCTATTTTGTAGGTTTCTAGGACCGCCC--GTAA 126 |||||||||||||| ||| | | | ||||||||| || | | | |||| |||| Sbjct 6720 GGAATAATAGAATATGACCTTGGTGGGCTATTTTGTTGGGT---ATGCACGCCAAGGTAA 6664 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| |||| ||| ||| | |||| | |||| | |||| |||||||||||||||| Sbjct 6663 TGATTAATAGGGACAGTTGAGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGA 6605 >seq11245 Length=13484 Score = 114 bits (126), Expect = 1e-23 Identities = 136/179 (76%), Gaps = 13/179 (7%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| ||||||| |||||| ||| ||||||||| ||||||| |||||||||| ||| Sbjct 5835 TTTACTGTGAAAAA-TTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACATTAACAT 5777 Query 70 GGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||| || | || | |||||||||| ||||| | || | ||||| Sbjct 5776 GGAATAATAAGATATGACCTTGATGGTCTATTTTGTTGGTTT---GCACATCAAGGTAAT 5720 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| ||| | ||| |||||| | |||| | |||| ||||||||||||||||| Sbjct 5719 GATTAAT----AGAGTTGGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 5665 >seq3835 Length=21566 Score = 114 bits (126), Expect = 1e-23 Identities = 136/179 (76%), Gaps = 13/179 (7%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| |||||| ||||||| ||| ||||||||| ||||||| |||||||||| ||| Sbjct 15189 TTTACTGTGAAAA-ATTAGAGTGTTTAAAGCAGGCGTTTGCTCATTGAATACATTAACAT 15247 Query 70 GGAATAATAGAATAGGA-CGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC-CCGTAAT 127 ||||||||| ||| || | || | |||||||||| ||||| | || | ||||| Sbjct 15248 GGAATAATAAGATATGACCTTGATGGTCTATTTTGTTGGTTT---GCACATCAAGGTAAT 15304 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 ||| ||| | ||| |||||| | |||| | |||| ||||||||||||||||| Sbjct 15305 GATTAAT----AGAGTTGGGGGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGGAT 15359 >seq24020 Length=18574 Score = 96.9 bits (106), Expect = 4e-18 Identities = 132/182 (73%), Gaps = 13/182 (7%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC----GAATACATTACCA 68 |||||| | |||||||||| | ||| ||||||||| || ||| |||||| | | || Sbjct 3549 TTTACTGTAAAAAAATTAGTGTGTTTAAAGCAGGCATTCACTCATTTGAATACTTGAACA 3490 Query 69 TGGAATAATAGAATA-GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC---GT 124 |||||||| || ||| || | || | |||||||||| ||||| ||| || || Sbjct 3489 TGGAATAAAAGGATATGGCCTTGGTGGTCTATTTTGTTGGTTT-----ACCCACCAAGGT 3435 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| || ||| ||| ||| || | |||| | |||| ||||||||||||||| Sbjct 3434 AATGATTAAATGGGACAGTTGGGAGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGG 3375 Query 185 AT 186 || Sbjct 3374 AT 3373 >seq2915 Length=29952 Score = 96.9 bits (106), Expect = 4e-18 Identities = 132/182 (73%), Gaps = 13/182 (7%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC----GAATACATTACCA 68 |||||| | |||||||||| | ||| ||||||||| || ||| |||||| | | || Sbjct 2451 TTTACTGTAAAAAAATTAGTGTGTTTAAAGCAGGCATTCACTCATTTGAATACTTGAACA 2392 Query 69 TGGAATAATAGAATA-GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC---GT 124 |||||||| || ||| || | || | |||||||||| ||||| ||| || || Sbjct 2391 TGGAATAAAAGGATATGGCCTTGGTGGTCTATTTTGTTGGTTT-----ACCCACCAAGGT 2337 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| || ||| ||| ||| || | |||| | |||| ||||||||||||||| Sbjct 2336 AATGATTAAATGGGACAGTTGGGAGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGG 2277 Query 185 AT 186 || Sbjct 2276 AT 2275 >seq1303 Length=17283 Score = 96.9 bits (106), Expect = 4e-18 Identities = 132/182 (73%), Gaps = 13/182 (7%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC----GAATACATTACCA 68 |||||| | |||||||||| | ||| ||||||||| || ||| |||||| | | || Sbjct 14817 TTTACTGTAAAAAAATTAGTGTGTTTAAAGCAGGCATTCACTCATTTGAATACTTGAACA 14876 Query 69 TGGAATAATAGAATA-GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC---GT 124 |||||||| || ||| || | || | |||||||||| ||||| ||| || || Sbjct 14877 TGGAATAAAAGGATATGGCCTTGGTGGTCTATTTTGTTGGTTT-----ACCCACCAAGGT 14931 Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184 |||||| || ||| ||| ||| || | |||| | |||| ||||||||||||||| Sbjct 14932 AATGATTAAATGGGACAGTTGGGAGTATTCATATTTCAGCGTCAGAGGTGAAATTCTTGG 14991 Query 185 AT 186 || Sbjct 14992 AT 14993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511867141440