Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq20799 251 1e-64 seq1902 251 1e-64 seq20524 246 6e-63 seq19046 246 6e-63 seq21458 244 2e-62 seq13571 224 2e-56 seq13329 224 2e-56 seq9847 132 9e-29 seq24193 77.0 6e-12 >seq20799 Length=16889 Score = 251 bits (278), Expect = 1e-64 Identities = 212/260 (82%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||| ||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 2651 CTTCTTAGATGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 2592 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| | |||||||| | Sbjct 2591 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATACGTTCAACGAGTATAC 2532 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || || |||||| |||||||| || | ||||||| |||||||| | Sbjct 2531 AACCTTGATCGATAGATCTGGGCAATCTTGTGAATGCGTATCGTGCTTGGGATAGATTGT 2472 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| || ||||||||| ||||||| Sbjct 2471 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAATGCAAGTCATCAGCTTGCGTTGA 2412 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 2411 TTACGTCCCTGCCCTTTGTA 2392 >seq1902 Length=8552 Score = 251 bits (278), Expect = 1e-64 Identities = 212/260 (82%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||| ||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 7376 CTTCTTAGATGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 7435 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| | |||||||| | Sbjct 7436 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATACGTTCAACGAGTATAC 7495 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || || |||||| |||||||| || | ||||||| |||||||| | Sbjct 7496 AACCTTGATCGATAGATCTGGGCAATCTTGTGAATGCGTATCGTGCTTGGGATAGATTGT 7555 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| || ||||||||| ||||||| Sbjct 7556 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAATGCAAGTCATCAGCTTGCGTTGA 7615 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 7616 TTACGTCCCTGCCCTTTGTA 7635 >seq20524 Length=18870 Score = 246 bits (272), Expect = 6e-63 Identities = 211/260 (81%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||| ||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 14519 CTTCTTAGATGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 14460 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||||||||||||| | |||||||| | Sbjct 14459 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATACGTTCAACGAGTATAC 14400 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || || |||||| |||||||| || | ||||||| |||||||| | Sbjct 14399 AACCTTGATCGATAGATCTGGGCAATCTTGTGAATGCGTATCGTGCTTGGGATAGATTGT 14340 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| || ||||||||| || |||| Sbjct 14339 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAATGCAAGTCATCAGCTTGCTTTGA 14280 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 14279 TTACGTCCCTGCCCTTTGTA 14260 >seq19046 Length=8721 Score = 246 bits (272), Expect = 6e-63 Identities = 211/260 (81%), Gaps = 3/260 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||| ||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 7450 CTTCTTAGATGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 7509 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 | |||||||||||||||||||||||||||||||||||||||| | |||||||| | Sbjct 7510 TCATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATACGTTCAACGAGTATAC 7569 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || || ||||||||||||||| || | |||| || |||||||| | Sbjct 7570 AACCTTGATCGATAGATCTGGGTAATCTTGTGAATGCGTATCGTTCTTGGGATAGATTGT 7629 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| || ||||||||| ||||||| Sbjct 7630 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAATGCAAGTCATCAGCTTGCGTTGA 7689 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 7690 TTACGTCCCTGCCCTTTGTA 7709 >seq21458 Length=12273 Score = 244 bits (270), Expect = 2e-62 Identities = 212/261 (81%), Gaps = 4/261 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||| ||||| | || | ||| || | ||||||| |||||||||||||||||| Sbjct 11250 CTTCTTAGATGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGGCAATAACAGGTCTG 11309 Query 129 TGATGCCC-TTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCA 187 |||||||| |||||||||||||||||||||||||||||||||| | |||||||| | Sbjct 11310 TGATGCCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATACGTTCAACGAGTATA 11369 Query 188 TCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCA 247 |||||| || || ||||||||||||||| || | |||| || |||||||| Sbjct 11370 CAACCTTGATCGATAGATCTGGGTAATCTTGTGAATGCGTATCGTTCTTGGGATAGATTG 11429 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 |||||||| | |||| |||||||||| |||||||| || ||||||||| |||||| Sbjct 11430 TTGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAATGCAAGTCATCAGCTTGCGTTG 11489 Query 308 ATTACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||||| Sbjct 11490 ATTACGTCCCTGCCCTTTGTA 11510 >seq13571 Length=15900 Score = 224 bits (248), Expect = 2e-56 Identities = 207/260 (80%), Gaps = 4/260 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||| ||||| | || | ||| || | | ||||| |||||||||||||||||| Sbjct 6630 CTTCTTAGATGGACTTTTGGGTAATCAAACCAAAGAAAGTTGGAGGCAATAACAGGTCTG 6571 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 ||||||||||||||||||||||| |||||||||||||||||| | |||||||| | Sbjct 6570 TGATGCCCTTAGATGTTCTGGGC-GCACGCGCGCTACACTGATACGTTCAACGAGTATAC 6512 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| ||| || ||||||||||||||| || | ||| ||| | |||||| | Sbjct 6511 AACCTTGATCGGTAGATCTGGGTAATCTTGTGAATGCGTATCGAGCTTGAGATAGAATGT 6452 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| | ||||||||| | ||||| Sbjct 6451 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAATTCAAGTCATCAGCTTGTGTTGA 6392 Query 309 TTACGTCCCTGCCCTTTGTA 328 ||||||||||||| |||||| Sbjct 6391 TTACGTCCCTGCCGTTTGTA 6372 >seq13329 Length=2281 Score = 224 bits (248), Expect = 2e-56 Identities = 206/260 (79%), Gaps = 8/260 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||| ||||| | || | ||| || | ||||||| ||| |||||||||||||| Sbjct 1042 CTTCTTAGATGGACTTTTGGGTAATCAAACCAAAGGAAGTTGGAGTCAATAACAGGTCTG 983 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||||||||||||||||||||||||||||| ||||| | |||||||| | Sbjct 982 TGATGCCCTTAGATGTTCTGGGCCGCACGCGC-----ACTGATACGTTCAACGAGTATAC 928 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248 |||||| || || ||||||||||||||| || | |||| || |||||||| | Sbjct 927 AACCTTGATCGATAGATCTGGGTAATCTTGTGAATGCGTATCGTTCTTGGGATAGATTGT 868 Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308 ||||||| | |||| |||||||||| |||||||| || ||||||||| ||||||| Sbjct 867 TGCAATTTTCAGTCTTGAACGAGGAATTCCTAGTAAATGCAAGTCATCAGCTTGCGTTGA 808 Query 309 TTACGTCCCTGCCCTTTGTA 328 |||||||||||||||||||| Sbjct 807 TTACGTCCCTGCCCTTTGTA 788 >seq9847 Length=66103 Score = 132 bits (146), Expect = 9e-29 Identities = 130/167 (78%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGCT---CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128 ||||||||| || | | || | ||| || | || |||| |||||||||||||||||| Sbjct 40587 CTTCTTAGATGGCTTTTTGGGTAATCAAACCAAAGGGAGTTGGAGGCAATAACAGGTCTG 40528 Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188 |||||| |||||||||||||| |||||||||||||||||||| | |||||||| || Sbjct 40527 TGATGCTCTTAGATGTTCTGGACCGCACGCGCGCTACACTGATACGTTCAACGAGTATAT 40468 Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCT 235 |||||| || | | ||||||||||||| || | ||||||| Sbjct 40467 AACCTTGATCGATAAATATGGGTAATCTTGTGAATGCGTATCGTGCT 40421 >seq24193 Length=34247 Score = 77.0 bits (84), Expect = 6e-12 Identities = 53/60 (88%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 263 TTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCC 322 || |||||||||| |||||||| ||| ||||||||| ||||||||||||||||||||| Sbjct 24993 TTGAACGAGGAATTCCTAGTAAATGCGAGTCATCAGCTTGCGTTGATTACGTCCCTGCCC 25052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946946283008