Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sclerospora_20graminicola_20[genbank_20GCA_5F001887855.2_202017-04- 05] 26,786 sequences; 299,901,251 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq21701 125 1e-26 seq20851 125 1e-26 seq20136 125 1e-26 seq19621 125 1e-26 seq19620 125 1e-26 seq18804 125 1e-26 seq4507 125 1e-26 seq1166 125 1e-26 seq19655 120 5e-25 seq13849 120 5e-25 seq9907 120 5e-25 seq3870 120 5e-25 seq2442 104 4e-20 >seq21701 Length=19260 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 15741 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 15684 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 15683 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 15626 >seq20851 Length=11993 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 5665 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 5722 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 5723 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 5780 >seq20136 Length=7186 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 5760 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 5817 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 5818 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 5875 >seq19621 Length=8862 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 5003 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 4946 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 4945 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 4888 >seq19620 Length=23786 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 17347 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 17290 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 17289 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 17232 >seq18804 Length=21373 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 15059 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 15002 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 15001 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 14944 >seq4507 Length=27251 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 27088 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 27031 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 27030 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 26973 >seq1166 Length=10574 Score = 125 bits (138), Expect = 1e-26 Identities = 100/118 (85%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 1130 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAGAAGCTAGT 1073 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1072 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 1015 >seq19655 Length=10972 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 4960 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 5017 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 5018 GCCGCCAAGCTACCATCTGTCGGATTATGGCTGAGCGCCTCTAAGTCAGAATCCATGC 5075 >seq13849 Length=13010 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 360 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 303 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || || ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 302 GCTGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 245 >seq9907 Length=11675 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 360 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 303 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || || ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 302 GCTGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 245 >seq3870 Length=15392 Score = 120 bits (132), Expect = 5e-25 Identities = 99/118 (84%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 15033 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 15090 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 || || ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 15091 GCTGCCAAGCTACCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 15148 >seq2442 Length=3360 Score = 104 bits (114), Expect = 4e-20 Identities = 90/109 (83%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||||| |||||||| ||||| | |||| || ||| Sbjct 107 GTACGAGAGGAACCGTTGG-TTCAGA-TAATTGGTAACTGCGGTTAGCTGAAAAGCTAGT 50 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAG 109 ||||| ||||| ||||||| |||||||||||||||||||||||||||| Sbjct 49 GCCGCCAAGCTGCCATCTGTCGGATTATGGCTGAACGCCTCTAAGTCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818987426304