Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq689 280 2e-73 >seq689 Length=39137 Score = 280 bits (310), Expect = 2e-73 Identities = 219/256 (86%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||| || |||| ||||||| ||| |||||||||||| | Sbjct 35597 GTACAAAGGGCAGGGACGTAATCAATGCAAGCT-GATGACTTGCGTTTACTAGGAATT-C 35654 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||| || ||||||||| ||||||||||| |||||| | ||||||||||| Sbjct 35655 CTCGTTGAAGATGAATAATTGCAATCATCTATCCCCAGCACGATTCACGTTCAAAGATTA 35714 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| | ||| || ||||||| | | |||||||| || ||||||||||||||||||||| Sbjct 35715 CCCAGGCCTTTCAGCCAAGGAAAAA-ACTCGTTGCATGAATCAGTGTAGCGCGCGTGCGG 35773 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 35774 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCACCGCTTAAACA 35833 Query 241 GCCAT-CTCCCTCGAA 255 || || |||||| || Sbjct 35834 GCGATAGTCCCTCTAA 35849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751933371390