Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq689 259 2e-66 >seq689 Length=39137 Score = 259 bits (286), Expect = 2e-66 Identities = 250/322 (78%), Gaps = 22/322 (7%) Strand=Plus/Minus Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||| || ||||||| | |||||||||| |||||||||||||||||||| ||| Sbjct 34132 GATGCTGACGAAATGGTTTCCTACAGCCCGTCTTGAAACACGGACCAAGGAGTCTAGCAT 34073 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGG---------- 491 | ||||| ||| ||||| |||||||||||||| |||||||||||| | Sbjct 34072 GGAAGCGAGCGTTAGGGTGGCAAACCCGTGCGCGAAATGAAAGTGAATGTTTTTTAATTA 34013 Query 492 ------AGGTGGGAACCCGTGAG--GGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543 ||||||||||| || | || ||||||||||||| || || | |||||| Sbjct 34012 AAACTTAGGTGGGAACCTGTAAAAAGGCGCACCATCGACCGGTCATG--GGCTTCGGTCC 33955 Query 544 --GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAG 601 ||| |||||| ||| | || ||||||||||||||||||||||||||| ||| || Sbjct 33954 AAGATCTGAGTATGAGTTTTTATGCTGGGACCCGAAAGATGGTGAACTATGCGTGATCAG 33895 Query 602 GGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCG 661 || |||||||| |||||| |||||||||||||| || ||||||| |||||||||||||| Sbjct 33894 GGCGAAGCCAGGGGAAACCCTGGTGGAGGCTCGAAGGGGTTCTGACGTGCAAATCGATCC 33835 Query 662 TCAAATTTGGGTATAGGGGCGA 683 ||| | ||| |||||||||||| Sbjct 33834 TCAGAGTTGCGTATAGGGGCGA 33813 Score = 165 bits (182), Expect = 3e-38 Identities = 147/183 (80%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||||||||||| | ||| || || | |||| |||| |||||||| | || |||| Sbjct 34547 TTCGACGAGTCGGATATCTTGAGACTGATGTCCTAA-TGGGTGGTAAATTCCATCCAAAG 34489 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| ||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 34488 CTAAATAAAGGCGAGAGACCGATAGCGAACAAGTACTGTGAAGGAAAGATGAAAAGAACT 34429 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| |||||||||||||||| || |||||||||||||||| ||| | || ||| || | Sbjct 34428 TTGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAAAGGAAAGTGTATGAAACTAGTGT 34369 Query 214 TGC 216 ||| Sbjct 34368 TGC 34366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079803818300