Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq689 297 3e-78
>seq689
Length=39137
Score = 297 bits (328), Expect = 3e-78
Identities = 214/246 (87%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 35754 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 35813
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACC---AACCATAG 132
||||||||| | | | | ||||||||||||||||| | || || | |
Sbjct 35814 AAACTTCCACCGCTTAAACAGCGATAGTCCCTCTAAGAAGTTCACAACTTTTAAAAAAAA 35873
Query 133 TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192
| || |||||||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 35874 T---TGCAACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATC 35930
Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 35931 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 35990
Query 253 TCTGTC 258
||||||
Sbjct 35991 TCTGTC 35996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796729402026
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |