Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq689 291 2e-76 >seq689 Length=39137 Score = 291 bits (322), Expect = 2e-76 Identities = 223/259 (86%), Gaps = 5/259 (2%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129 ||||||||||||||||||| | | |||| | |||||||||||||||||||||||||||| Sbjct 35853 CTTCTTAGAGGGACTATCGCTGTTTAAGCGG-TGGAAGTTTGAGGCAATAACAGGTCTGT 35795 Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATC 189 ||||||||||||||||||||||||||||||||||||||||| | ||||||||| | Sbjct 35794 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATTCATGCAACGAGTTTTTT 35735 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATT 249 ||||||| | |||| |||||||||||| | || | |||||||||||||||| ||| Sbjct 35734 -CCTTGGCTGAAAGGCCTGGGTAATCTT-TGAACGTGAATCGTGCTGGGGATAGATGATT 35677 Query 250 GCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309 ||||||||| ||||||||||||||| |||||||| ||| ||||||||| || ||||| Sbjct 35676 GCAATTATTCATCTTCAACGAGGAATTCCTAGTAAACGCAAGTCATCAGCTTGCATTGAT 35617 Query 310 TACGTCCCTGCCCTTTGTA 328 ||||||||||||||||||| Sbjct 35616 TACGTCCCTGCCCTTTGTA 35598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947113369088