Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stramenopiles_20sp._20TOSAG23-
2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq689 625 1e-176
>seq689
Length=39137
Score = 625 bits (692), Expect = 1e-176
Identities = 465/538 (86%), Gaps = 12/538 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || ||| ||||||||||||||| |||| | |||||||||||||| |||||
Sbjct 32031 CTTTTGTTCCACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 32090
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||| |||| | || | ||
Sbjct 32091 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGTTGTCTCCCACGTAGGTC 32150
Query 127 GGCCCGCGAAGG---ACC-TTAACGCCAGAA--AATGGTCGGT--GAAGACCAGTTCCG- 177
| | || ||| ||||||| |||| |||| | | | | | | |||
Sbjct 32151 AAGCAACTAAAAGTTACCATTAACGCTAGAACCAATGTACCAAAGGCACATCGGGTCCTA 32210
Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237
| |||| || ||||||||| |||| ||| |||||||||||||| | |||||| ||
Sbjct 32211 CGTCATGGAATAAGTAAAACAACGCGAAGAGTAGTGGTATTTCAAGTTTGCCGAA---GC 32267
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||||||||| ||||||||| |||||||||||| ||| |||||||||||||||||||
Sbjct 32268 TCCCACTTATGCTACACCTCAACGGTCATTTCACAACGTCAGACTAGAGTCAAGCTCAAC 32327
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 32328 AGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 32387
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 32388 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 32447
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 32448 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 32507
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 32508 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 32565
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635050444608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |