Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stramenopiles_20sp._20TOSAG23- 2_20[genbank_20GCA_5F900128395.1_202016-12-02] 9,146 sequences; 32,837,229 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq689 625 1e-176 >seq689 Length=39137 Score = 625 bits (692), Expect = 1e-176 Identities = 465/538 (86%), Gaps = 12/538 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 32031 CTTTTGTTCCACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 32090 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||| |||| | || | || Sbjct 32091 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGTTGTCTCCCACGTAGGTC 32150 Query 127 GGCCCGCGAAGG---ACC-TTAACGCCAGAA--AATGGTCGGT--GAAGACCAGTTCCG- 177 | | || ||| ||||||| |||| |||| | | | | | | ||| Sbjct 32151 AAGCAACTAAAAGTTACCATTAACGCTAGAACCAATGTACCAAAGGCACATCGGGTCCTA 32210 Query 178 CTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGC 237 | |||| || ||||||||| |||| ||| |||||||||||||| | |||||| || Sbjct 32211 CGTCATGGAATAAGTAAAACAACGCGAAGAGTAGTGGTATTTCAAGTTTGCCGAA---GC 32267 Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||||||||| ||||||||| |||||||||||| ||| ||||||||||||||||||| Sbjct 32268 TCCCACTTATGCTACACCTCAACGGTCATTTCACAACGTCAGACTAGAGTCAAGCTCAAC 32327 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 32328 AGGGTCTTCTTTCCCCGCTGATTATTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 32387 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32388 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 32447 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32448 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 32507 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 32508 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 32565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635050444608